RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HERC6Q8IVU3 1022 aa22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 ZNF444Q8N0Y2 327 aaPredicted RBP22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 STAG1Q8WVM7 1258 aa22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 HLA-CQ95604 372 aa22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 LCHNA4D1U4 455 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 M0R2C6 588 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 FDX1P10109 184 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 MCCP23508 829 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 TKFCQ3LXA3 575 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 KCTD1Q719H9 257 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 TMCO2Q7Z6W1 182 aaPredicted RBP22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 NEDD1Q8NHV4 660 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 SLC9A7Q96T83 725 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 VTA1Q9NP79 307 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 ZBTB40Q9NUA8 1239 aa22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 ISY1Q9ULR0 285 aaKnown RBP22.65■■□□□ 1.22
HMGCS1-206ENST00000511774 GPAA1O43292 621 aa22.64■■□□□ 1.21
HMGCS1-206ENST00000511774 MYL3P08590 195 aa22.64■■□□□ 1.21
HMGCS1-206ENST00000511774 NBPF20Q3BBV1 942 aa22.64■■□□□ 1.21
HMGCS1-206ENST00000511774 GMCL1Q96IK5 515 aa22.64■■□□□ 1.21
HMGCS1-206ENST00000511774 WDFY4Q6ZS81 3184 aa22.64■■□□□ 1.21
HMGCS1-206ENST00000511774 HMMRO75330 724 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 IQCF3P0C7M6 154 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 SUPT20HL2P0C7V6 817 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 NSMFQ6X4W1 530 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 FAM160B2Q86V87 743 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 PHOSPHO2Q8TCD6 241 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 CHURC1Q8WUH1 139 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 APPBP2Q92624 585 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 PRR12Q9ULL5 1215 aa22.63■■□□□ 1.21
HMGCS1-206ENST00000511774 SLC1A4P43007 532 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 TDO2P48775 406 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 IKQ13123 557 aaPredicted RBP22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 GPNMBQ14956 572 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 KBTBD3Q8NAB2 608 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 GDPD5Q8WTR4 605 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 WDR11Q9BZH6 1224 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 POLR3EQ9NVU0 708 aa22.62■■□□□ 1.21
HMGCS1-206ENST00000511774 RBM47A0AV96 593 aaKnown RBP22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 PI4K2BG5E9Z4 385 aa22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 ACTN1P12814 892 aa22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 TFAP4Q01664 338 aa22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 CTAGE1Q96RT6 745 aa22.61■■□□□ 1.21
HMGCS1-206ENST00000511774 RNF113AO15541 343 aaKnown RBP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 PLA2G6O60733 806 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 TSPY3P0CV98 308 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 TSPY8P0CW00 308 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 RFC2P35250 354 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 ALDH5A1P51649 535 aaPredicted RBP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 BAATQ14032 418 aaPredicted RBP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 TCTN1Q2MV58 587 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 FAM47CQ5HY64 1035 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 ALYREFQ86V81 257 aaKnown RBP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 IFNL3Q8IZI9 196 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 COPS5Q92905 334 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 MTG1Q9BT17 334 aaPredicted RBP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 FTOQ9C0B1 505 aaKnown RBP eCLIP22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 INCENPQ9NQS7 918 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 CCPG1Q9ULG6 757 aa22.6■■□□□ 1.21
HMGCS1-206ENST00000511774 PITPNM1O00562 1244 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 NFIBO00712 420 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 NMT2O60551 498 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 RCSD1Q6JBY9 416 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 OR6J1Q8NGC5 347 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 SEC62Q99442 399 aaKnown RBP22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 IL17RBQ9NRM6 502 aa22.59■■□□□ 1.21
HMGCS1-206ENST00000511774 TRIOO75962 3097 aa22.58■■□□□ 1.21
HMGCS1-206ENST00000511774 APPP05067 770 aa22.58■■□□□ 1.21
HMGCS1-206ENST00000511774 DEFB103AP81534 67 aa22.58■■□□□ 1.21
HMGCS1-206ENST00000511774 TTBK2Q6IQ55 1244 aa22.58■■□□□ 1.21
HMGCS1-206ENST00000511774 ZNF287Q9HBT7 754 aa22.58■■□□□ 1.21
HMGCS1-206ENST00000511774 SIP14410 1827 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 PATL2C9JE40 543 aaKnown RBP22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 CPT1AP50416 773 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 WDR5P61964 334 aaKnown RBP22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 NFRKBQ6P4R8 1299 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 SLC30A10Q6XR72 485 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 LRRCC1Q9C099 1032 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 ECHDC1Q9NTX5 307 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
HMGCS1-206ENST00000511774 KIF28PB7ZC32 967 aa22.56■■□□□ 1.2
HMGCS1-206ENST00000511774 ICAM1P05362 532 aa22.56■■□□□ 1.2
HMGCS1-206ENST00000511774 SLC16A2P36021 539 aa22.56■■□□□ 1.2
HMGCS1-206ENST00000511774 RANBP17Q9H2T7 1088 aaKnown RBP22.56■■□□□ 1.2
HMGCS1-206ENST00000511774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.56■■□□□ 1.2
HMGCS1-206ENST00000511774 FOXP2O15409 715 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 GNAT2P19087 354 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 PPARAQ07869 468 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 RETREG2Q8NC44 543 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 DHX38Q92620 1227 aaKnown RBP22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 UBE2ZQ9H832 354 aaPredicted RBP22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 SUGCTQ9HAC7 445 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 MTUS1Q9ULD2 1270 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 STX8Q9UNK0 236 aa22.55■■□□□ 1.2
HMGCS1-206ENST00000511774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.54■■□□□ 1.2
HMGCS1-206ENST00000511774 A6NJR5 290 aa22.54■■□□□ 1.2
HMGCS1-206ENST00000511774 BAIAP3O94812 1187 aa22.54■■□□□ 1.2
HMGCS1-206ENST00000511774 ARIH2O95376 493 aa22.54■■□□□ 1.2
HMGCS1-206ENST00000511774 PDE4BQ07343 736 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms