RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 RNF180Q86T96 592 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 MCF2L2Q86YR7 1114 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 DNERQ8NFT8 737 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 TAAR1Q96RJ0 339 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 TSEN34Q9BSV6 310 aaKnown RBP18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 PHF24Q9UPV7 400 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 MCM3APO60318 1980 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 KBTBD13C9JR72 458 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 GJA9P57773 515 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 TMEM63BQ5T3F8 832 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 FERMT2Q96AC1 680 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 COL20A1Q9P218 1284 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 GNEQ9Y223 722 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
PDLIM5-216ENST00000511767 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 CTAGE5O15320 804 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 REC8O95072 547 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 SMPD1P17405 629 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 EDNRBP24530 442 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 KIF5BP33176 963 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 GNAQP50148 359 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 ATN1P54259 1190 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 GHRHRQ02643 423 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 KCNA10Q16322 511 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 TCEANC2Q96MN5 208 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
PDLIM5-216ENST00000511767 MYADML2A6NDP7 307 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 EPB41L2O43491 1005 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 CALM1P0DP23 149 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 CALM2P0DP24 149 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 CALM3P0DP25 149 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 RXRAP19793 462 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 TRAF1Q13077 416 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 C7orf61Q8IZ16 206 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 SAMD3Q8N6K7 520 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 COLQQ9Y215 455 aaPredicted RBP18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 Q9Y3F1 56 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 SYNRGQ9UMZ2 1314 aa18.72■□□□□ 0.59
PDLIM5-216ENST00000511767 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 PLEKHA8P1O95397 391 aa18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 CST5P28325 142 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 HSD17B4P51659 736 aa18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 SNX17Q15036 470 aa18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 FBXO16Q8IX29 292 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
PDLIM5-216ENST00000511767 B4DLN1 442 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 CFBP00751 764 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 CPA1P15085 419 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 PTGS1P23219 599 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 ACLYP53396 1101 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 PDE4DQ08499 809 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 DUSP28Q4G0W2 176 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 GNASQ5JWF2 1037 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 RAB11FIP4Q86YS3 637 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 RMDN3Q96TC7 470 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 PRO3102Q9H379 93 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 SPC25Q9HBM1 224 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 ZMYND8Q9ULU4 1186 aaPredicted RBP18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 DNAH12Q6ZR08 3092 aa18.7■□□□□ 0.58
PDLIM5-216ENST00000511767 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 RTP1P59025 263 aa18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 PCSK9Q8NBP7 692 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 RRP36Q96EU6 259 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 JAKMIP1Q96N16 626 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 MPHOSPH6Q99547 160 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 FAM217BQ9NTX9 383 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-216ENST00000511767 LCTP09848 1927 aa18.68■□□□□ 0.58
PDLIM5-216ENST00000511767 ALPK3Q96L96 1907 aa18.68■□□□□ 0.58
PDLIM5-216ENST00000511767 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
PDLIM5-216ENST00000511767 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
PDLIM5-216ENST00000511767 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
PDLIM5-216ENST00000511767 MOXD2PA6NHM9 499 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms