RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 NFIBO00712 420 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 SLC16A2P36021 539 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 PDE1AP54750 535 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 TJAP1Q5JTD0 557 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 KIAA1211Q6ZU35 1233 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 CLEC4DQ8WXI8 215 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 GAS2L1Q99501 681 aaPredicted RBP26.95■■□□□ 1.9
SMAD5-207ENST00000511116 SCN10AQ9Y5Y9 1956 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 NCOR1O75376 2440 aa26.95■■□□□ 1.9
SMAD5-207ENST00000511116 PSMC6P62333 389 aa26.94■■□□□ 1.9
SMAD5-207ENST00000511116 ALDH8A1Q9H2A2 487 aaPredicted RBP26.94■■□□□ 1.9
SMAD5-207ENST00000511116 PRDM12Q9H4Q4 367 aa26.94■■□□□ 1.9
SMAD5-207ENST00000511116 MSRAQ9UJ68 235 aa26.94■■□□□ 1.9
SMAD5-207ENST00000511116 PNMA2Q9UL42 364 aa26.94■■□□□ 1.9
SMAD5-207ENST00000511116 A0A0D9SFI3 127 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 SNHG28P0DPA3 235 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 PDHBP11177 359 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 ADGRE1Q14246 886 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 ANKRD45Q5TZF3 282 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 FAM227BQ96M60 508 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 POLR3EQ9NVU0 708 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 MTMR7Q9Y216 660 aa26.93■■□□□ 1.9
SMAD5-207ENST00000511116 WDR19Q8NEZ3 1342 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 HSPD1P10809 573 aaKnown RBP26.92■■□□□ 1.9
SMAD5-207ENST00000511116 EDNRBP24530 442 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 CCL23P55773 120 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 PURAQ00577 322 aaKnown RBP26.92■■□□□ 1.9
SMAD5-207ENST00000511116 MCMDC2Q4G0Z9 681 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 TTC14Q96N46 770 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 WDR11Q9BZH6 1224 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 PRDM6Q9NQX0 595 aa26.92■■□□□ 1.9
SMAD5-207ENST00000511116 YBX2Q9Y2T7 364 aaKnown RBP26.92■■□□□ 1.9
SMAD5-207ENST00000511116 PCP11498 1178 aaKnown RBP26.91■■□□□ 1.9
SMAD5-207ENST00000511116 HDAC1Q13547 482 aaPredicted RBP26.91■■□□□ 1.9
SMAD5-207ENST00000511116 SLC30A10Q6XR72 485 aa26.91■■□□□ 1.9
SMAD5-207ENST00000511116 OTOP2Q7RTS6 562 aa26.91■■□□□ 1.9
SMAD5-207ENST00000511116 RPUSD2Q8IZ73 545 aaKnown RBP26.91■■□□□ 1.9
SMAD5-207ENST00000511116 TRANK1O15050 2925 aa26.91■■□□□ 1.9
SMAD5-207ENST00000511116 FRMPD2Q68DX3 1309 aaPredicted RBP26.9■■□□□ 1.9
SMAD5-207ENST00000511116 RRP1P56182 461 aaKnown RBP26.9■■□□□ 1.9
SMAD5-207ENST00000511116 ZNF543Q08ER8 600 aa26.9■■□□□ 1.9
SMAD5-207ENST00000511116 ZNF589Q86UQ0 364 aaPredicted RBP26.9■■□□□ 1.9
SMAD5-207ENST00000511116 NKX2-4Q9H2Z4 354 aa26.9■■□□□ 1.9
SMAD5-207ENST00000511116 GPCPD1Q9NPB8 672 aa26.9■■□□□ 1.9
SMAD5-207ENST00000511116 SUPT20HL2P0C7V6 817 aa26.89■■□□□ 1.9
SMAD5-207ENST00000511116 CPT1AP50416 773 aa26.89■■□□□ 1.9
SMAD5-207ENST00000511116 ATXN2LQ8WWM7 1075 aaKnown RBP26.89■■□□□ 1.9
SMAD5-207ENST00000511116 TOMM22Q9NS69 142 aa26.89■■□□□ 1.9
SMAD5-207ENST00000511116 PTPDC1A2A3K4 754 aa26.88■■□□□ 1.89
SMAD5-207ENST00000511116 NKRFO15226 690 aaKnown RBP eCLIP26.88■■□□□ 1.89
SMAD5-207ENST00000511116 PFKMP08237 780 aa26.88■■□□□ 1.89
SMAD5-207ENST00000511116 RRP12Q5JTH9 1297 aaKnown RBP26.88■■□□□ 1.89
SMAD5-207ENST00000511116 DNERQ8NFT8 737 aa26.88■■□□□ 1.89
SMAD5-207ENST00000511116 TRMT13Q9NUP7 481 aaKnown RBP26.88■■□□□ 1.89
SMAD5-207ENST00000511116 ZBTB47Q9UFB7 747 aaPredicted RBP26.88■■□□□ 1.89
SMAD5-207ENST00000511116 TNKSO95271 1327 aa26.88■■□□□ 1.89
SMAD5-207ENST00000511116 REV3LO60673 3130 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 RPS6P62753 249 aaKnown RBP26.87■■□□□ 1.89
SMAD5-207ENST00000511116 RNF207Q6ZRF8 634 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 SCLYQ96I15 445 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 MTG1Q9BT17 334 aaPredicted RBP26.87■■□□□ 1.89
SMAD5-207ENST00000511116 SLC28A3Q9HAS3 691 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 PCDHA11Q9Y5I1 949 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 SLC4A7Q9Y6M7 1214 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 CCDC171Q6TFL3 1326 aa26.87■■□□□ 1.89
SMAD5-207ENST00000511116 A6NJR5 290 aa26.86■■□□□ 1.89
SMAD5-207ENST00000511116 NMIQ13287 307 aaPredicted RBP26.86■■□□□ 1.89
SMAD5-207ENST00000511116 RGS22Q8NE09 1264 aa26.86■■□□□ 1.89
SMAD5-207ENST00000511116 OR6J1Q8NGC5 347 aa26.86■■□□□ 1.89
SMAD5-207ENST00000511116 SCFD2Q8WU76 684 aa26.86■■□□□ 1.89
SMAD5-207ENST00000511116 MAF1Q9H063 256 aa26.86■■□□□ 1.89
SMAD5-207ENST00000511116 BDP1A6H8Y1 2624 aa26.85■■□□□ 1.89
SMAD5-207ENST00000511116 CYP2C9P11712 490 aa26.85■■□□□ 1.89
SMAD5-207ENST00000511116 CALML3P27482 149 aa26.85■■□□□ 1.89
SMAD5-207ENST00000511116 TBC1D10CQ8IV04 446 aa26.85■■□□□ 1.89
SMAD5-207ENST00000511116 THEGQ9P2T0 379 aa26.85■■□□□ 1.89
SMAD5-207ENST00000511116 SCN5AQ14524 2016 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 KPNA6O60684 536 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 NT5C2P49902 561 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 HAND2P61296 217 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 PDE4DQ08499 809 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 PPP2R5BQ15173 497 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 GPATCH4Q5T3I0 446 aaKnown RBP26.84■■□□□ 1.89
SMAD5-207ENST00000511116 NFRKBQ6P4R8 1299 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 MFSD6Q6ZSS7 791 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 CRBNQ96SW2 442 aa26.84■■□□□ 1.89
SMAD5-207ENST00000511116 TANC1Q9C0D5 1861 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 PITPNM1O00562 1244 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 MYL3P08590 195 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 RABGGTBP53611 331 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 PTPN11Q06124 597 aaPredicted RBP26.83■■□□□ 1.89
SMAD5-207ENST00000511116 TTLL4Q14679 1199 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 NBPF20Q3BBV1 942 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 ASB2Q96Q27 587 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 MPHOSPH6Q99547 160 aaKnown RBP26.83■■□□□ 1.89
SMAD5-207ENST00000511116 RAD50Q92878 1312 aa26.83■■□□□ 1.89
SMAD5-207ENST00000511116 LAMA4Q16363 1823 aa26.82■■□□□ 1.88
SMAD5-207ENST00000511116 TNFRSF10AO00220 468 aa26.82■■□□□ 1.88
SMAD5-207ENST00000511116 ATP2A2P16615 1042 aaKnown RBP26.82■■□□□ 1.88
SMAD5-207ENST00000511116 RFC2P35250 354 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms