RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 GPHNQ9NQX3 736 aaPredicted RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 POLR3EQ9NVU0 708 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 DDX49Q9Y6V7 483 aaKnown RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 FRMPD2Q68DX3 1309 aaPredicted RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 PTPDC1A2A3K4 754 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 B4DLN1 442 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 B4GALT4O60513 344 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 HSPD1P10809 573 aaKnown RBP9.81□□□□□ -0.84
TRIO-217ENST00000511019 PTGS1P23219 599 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 CALML3P27482 149 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 ALDH5A1P51649 535 aaPredicted RBP9.81□□□□□ -0.84
TRIO-217ENST00000511019 MRPL12P52815 198 aaKnown RBP9.81□□□□□ -0.84
TRIO-217ENST00000511019 BRDTQ58F21 947 aaPredicted RBP9.81□□□□□ -0.84
TRIO-217ENST00000511019 RNF207Q6ZRF8 634 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 MFSD6Q6ZSS7 791 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 RASGRP2Q7LDG7 609 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 PRDM12Q9H4Q4 367 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 LAMA3Q16787 3333 aa9.81□□□□□ -0.84
TRIO-217ENST00000511019 RBM47A0AV96 593 aaKnown RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 NFIBO00712 420 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 KPNA6O60684 536 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 MYL3P08590 195 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 PDHBP11177 359 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 PCP11498 1178 aaKnown RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 IGFBP4P22692 258 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 CPT1AP50416 773 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 RRP1P56182 461 aaKnown RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 HAND2P61296 217 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 PDE4DQ08499 809 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 HDAC1Q13547 482 aaPredicted RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 AKNAD1Q5T1N1 836 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 OR6J1Q8NGC5 347 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 CLEC4DQ8WXI8 215 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 CRBNQ96SW2 442 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 MTG1Q9BT17 334 aaPredicted RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 NOC4LQ9BVI4 516 aaKnown RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 ALDH8A1Q9H2A2 487 aaPredicted RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
TRIO-217ENST00000511019 SLC4A7Q9Y6M7 1214 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 UMODL1Q5DID0 1318 aa9.8□□□□□ -0.84
TRIO-217ENST00000511019 A0A0D9SFI3 127 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 ZNF213O14771 459 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 NKRFO15226 690 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIO-217ENST00000511019 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
TRIO-217ENST00000511019 RPS6P62753 249 aaKnown RBP9.79□□□□□ -0.84
TRIO-217ENST00000511019 PURAQ00577 322 aaKnown RBP9.79□□□□□ -0.84
TRIO-217ENST00000511019 ZNF543Q08ER8 600 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
TRIO-217ENST00000511019 FAM47CQ5HY64 1035 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 TJAP1Q5JTD0 557 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 USP38Q8NB14 1042 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 DNERQ8NFT8 737 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 ATXN2LQ8WWM7 1075 aaKnown RBP9.79□□□□□ -0.84
TRIO-217ENST00000511019 ESR2Q92731 530 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 SCLYQ96I15 445 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 NKX2-4Q9H2Z4 354 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 MYH4Q9Y623 1939 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 RAD50Q92878 1312 aa9.79□□□□□ -0.84
TRIO-217ENST00000511019 ZBBXA8MT70 800 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 PFKMP08237 780 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 TXNP10599 105 aaKnown RBP9.78□□□□□ -0.84
TRIO-217ENST00000511019 CYP2C9P11712 490 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 SDSP20132 328 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
TRIO-217ENST00000511019 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 CCDC178Q5BJE1 867 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
TRIO-217ENST00000511019 SLC30A10Q6XR72 485 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 DGKHQ86XP1 1220 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 RGS22Q8NE09 1264 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 SCFD2Q8WU76 684 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 RWDD1Q9H446 243 aaPredicted RBP9.78□□□□□ -0.84
TRIO-217ENST00000511019 TRMT13Q9NUP7 481 aaKnown RBP9.78□□□□□ -0.84
TRIO-217ENST00000511019 TNKSO95271 1327 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 CCDC171Q6TFL3 1326 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 WDR19Q8NEZ3 1342 aa9.78□□□□□ -0.84
TRIO-217ENST00000511019 A6NJR5 290 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 GOLGA8HP0CJ92 632 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 SNHG28P0DPA3 235 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 ACTN1P12814 892 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 ATP2A2P16615 1042 aaKnown RBP9.77□□□□□ -0.85
TRIO-217ENST00000511019 NT5C2P49902 561 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 RABGGTBP53611 331 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
TRIO-217ENST00000511019 AAMPQ13685 434 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 ADGRE1Q14246 886 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 PPP2R5BQ15173 497 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.85
TRIO-217ENST00000511019 NFRKBQ6P4R8 1299 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms