RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 CDC37Q16543 378 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 FAM126BQ8IXS8 530 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 ADGRF4Q8IZF3 695 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 TBC1D5Q92609 795 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 UBAC1Q9BSL1 405 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 WDR11Q9BZH6 1224 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 MROH7Q68CQ1 1323 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 WDR19Q8NEZ3 1342 aa23.24■■□□□ 1.31
ARHGEF28-208ENST00000509848 LCTP09848 1927 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 LRRC37A2A6NM11 1700 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 CHMLP26374 656 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 PSMC6P62333 389 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 PTH1RQ03431 593 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 SLC17A8Q8NDX2 589 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 RNPC3Q96LT9 517 aaKnown RBP23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 PPP1R12CQ9BZL4 782 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 GRIN2DO15399 1336 aa23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 LAMA2P24043 3122 aaKnown RBP23.23■■□□□ 1.31
ARHGEF28-208ENST00000509848 LAMA4Q16363 1823 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 DHX16O60231 1041 aaKnown RBP23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 NT5C2P49902 561 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 PDE4DQ08499 809 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 ITGA7Q13683 1181 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 DUSP28Q4G0W2 176 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 FAM109BQ6ICB4 259 aaPredicted RBP23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 GUCD1Q96NT3 240 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 CNNM2Q9H8M5 875 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 STXBP5LQ9Y2K9 1186 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 Q9Y3F1 56 aa23.22■■□□□ 1.31
ARHGEF28-208ENST00000509848 TLR3O15455 904 aaKnown RBP23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 ZEB2O60315 1214 aa23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 PARP1P09874 1014 aaKnown RBP23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 ASPRV1Q53RT3 343 aa23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 IFIT1BQ5T764 474 aaKnown RBP23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 MFSD5Q6N075 450 aa23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 STAG2Q8N3U4 1231 aa23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 COL6A3P12111 3177 aa23.21■■□□□ 1.31
ARHGEF28-208ENST00000509848 CABYRO75952 493 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 CD4P01730 458 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 QRICH1Q2TAL8 776 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 ZNF697Q5TEC3 545 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 SLC43A3Q8NBI5 491 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 TRPV6Q9H1D0 765 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 TAF6LQ9Y6J9 622 aa23.2■■□□□ 1.3
ARHGEF28-208ENST00000509848 RBM47A0AV96 593 aaKnown RBP23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 CSF2RAP15509 400 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 EDNRBP24530 442 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 CYP2C18P33260 490 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 SEC23AQ15436 765 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 C16orf59Q7L2K0 433 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 OR6J1Q8NGC5 347 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 RUFY2Q8WXA3 655 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 COPS5Q92905 334 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 TAAR1Q96RJ0 339 aa23.19■■□□□ 1.3
ARHGEF28-208ENST00000509848 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.19■■□□□ 1.35e-6■■■□□ 16.3
ARHGEF28-208ENST00000509848 ABCB11O95342 1321 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 RAD50Q92878 1312 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 LOC102724159A0A0B4J2E5 919 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 MYL3P08590 195 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 CYP21A2P08686 494 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 ACRP10323 421 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 SMAD3P84022 425 aaKnown RBP23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 PWP2Q15269 919 aaKnown RBP23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 FBXO11Q86XK2 927 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 RGS22Q8NE09 1264 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 DNERQ8NFT8 737 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 PPP1R13LQ8WUF5 828 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 SEMA6BQ9H3T3 888 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 COL20A1Q9P218 1284 aa23.18■■□□□ 1.3
ARHGEF28-208ENST00000509848 UMODL1Q5DID0 1318 aa23.17■■□□□ 1.3
ARHGEF28-208ENST00000509848 TRDNQ13061 729 aa23.17■■□□□ 1.3
ARHGEF28-208ENST00000509848 SYTL5Q8TDW5 730 aaPredicted RBP23.17■■□□□ 1.3
ARHGEF28-208ENST00000509848 MPHOSPH6Q99547 160 aaKnown RBP23.17■■□□□ 1.3
ARHGEF28-208ENST00000509848 SENP2Q9HC62 589 aa23.17■■□□□ 1.3
ARHGEF28-208ENST00000509848 B4GALT4O60513 344 aa23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 PPIGQ13427 754 aaKnown RBP eCLIP23.16■■□□□ 1.32e-6■■■□□ 16.6
ARHGEF28-208ENST00000509848 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 CHST3Q7LGC8 479 aa23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 TMEM199Q8N511 208 aa23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 TTYH1Q9H313 450 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 U3KPZ7 1027 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF28-208ENST00000509848 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 SGSM2O43147 1006 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 ARIH2O95376 493 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 TMEM240Q5SV17 173 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 SCFD2Q8WU76 684 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 CDX2Q99626 313 aaPredicted RBP23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 MAD2L2Q9UI95 211 aa23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 MRPL11Q9Y3B7 192 aaKnown RBP23.15■■□□□ 1.3
ARHGEF28-208ENST00000509848 E7EWF7 191 aa23.14■■□□□ 1.29
ARHGEF28-208ENST00000509848 IFIT3O14879 490 aaKnown RBP23.14■■□□□ 1.29
ARHGEF28-208ENST00000509848 CPT1AP50416 773 aa23.14■■□□□ 1.29
ARHGEF28-208ENST00000509848 CCL23P55773 120 aa23.14■■□□□ 1.29
ARHGEF28-208ENST00000509848 PURAQ00577 322 aaKnown RBP23.14■■□□□ 1.29
ARHGEF28-208ENST00000509848 SEPT14Q6ZU15 432 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms