RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 KARSQ15046 597 aaKnown RBP10.23□□□□□ -0.77
SEC24D-209ENST00000509818 CALCRLQ16602 461 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 UBE2SQ16763 222 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 CCDC186Q7Z3E2 898 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 CABP7Q86V35 215 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 TEX2Q8IWB9 1127 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 ENOX1Q8TC92 643 aaKnown RBP10.23□□□□□ -0.77
SEC24D-209ENST00000509818 CHURC1Q8WUH1 139 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 ZNF830Q96NB3 372 aaPredicted RBP10.23□□□□□ -0.77
SEC24D-209ENST00000509818 MTMR9Q96QG7 549 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
SEC24D-209ENST00000509818 RAB34Q9BZG1 259 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
SEC24D-209ENST00000509818 RMND1Q9NWS8 449 aa10.23□□□□□ -0.77
SEC24D-209ENST00000509818 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
SEC24D-209ENST00000509818 CDC25AP30304 524 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 TECP42680 631 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 ECE1P42892 770 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.779e-9■■□□□ 12.5
SEC24D-209ENST00000509818 USP11P51784 963 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 STAT2P52630 851 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 FANCCQ00597 558 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 PDIA5Q14554 519 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
SEC24D-209ENST00000509818 PRIMPOLQ96LW4 560 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 GINM1Q9NU53 330 aa10.22□□□□□ -0.77
SEC24D-209ENST00000509818 PLA2G6O60733 806 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.77
SEC24D-209ENST00000509818 ASNSP08243 561 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 PTGS1P23219 599 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 TXKP42681 527 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 GMPSP49915 693 aaPredicted RBP10.21□□□□□ -0.77
SEC24D-209ENST00000509818 DHX8Q14562 1220 aaKnown RBP10.21□□□□□ -0.77
SEC24D-209ENST00000509818 RASA3Q14644 834 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 IGSF22Q8N9C0 903 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 ACER1Q8TDN7 264 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 CALML4Q96GE6 196 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
SEC24D-209ENST00000509818 VCPKMTQ9H867 229 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 IFNKQ9P0W0 207 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 IMPACTQ9P2X3 320 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 CNOT7Q9UIV1 285 aaKnown RBP10.21□□□□□ -0.77
SEC24D-209ENST00000509818 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.77
SEC24D-209ENST00000509818 SHTN1A0MZ66 631 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 PP2D1A8MPX8 630 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 EDIL3O43854 480 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 TDP2O95551 362 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 SERPINC1P01008 464 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 RPN1P04843 607 aaKnown RBP10.21□□□□□ -0.78
SEC24D-209ENST00000509818 MICALL2Q8IY33 904 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 SPICE1Q8N0Z3 855 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 STAMQ92783 540 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 MTRQ99707 1265 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 XPO4Q9C0E2 1151 aaKnown RBP10.21□□□□□ -0.78
SEC24D-209ENST00000509818 HSD3B7Q9H2F3 369 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 BLZF1Q9H2G9 400 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 FANCLQ9NW38 375 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 DDX25Q9UHL0 483 aaKnown RBP10.21□□□□□ -0.78
SEC24D-209ENST00000509818 NRBP1Q9UHY1 535 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 GJA3Q9Y6H8 435 aa10.21□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 MEIS2O14770 477 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 SLC37A4O43826 429 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 MARCH6O60337 910 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 CDK11BP21127 795 aaKnown RBP10.2□□□□□ -0.78
SEC24D-209ENST00000509818 CASP1P29466 404 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 UBASH3AP57075 661 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 GSDMDP57764 484 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 SNAP25P60880 206 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 AMPD3Q01432 767 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 CUL4BQ13620 913 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 NAALADL2Q58DX5 795 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 FAM83BQ5T0W9 1011 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 ZNF658Q5TYW1 1059 aaPredicted RBP10.2□□□□□ -0.78
SEC24D-209ENST00000509818 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 USP17L6PQ6QN14 398 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 MOXD1Q6UVY6 613 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 CCDC47Q96A33 483 aaKnown RBP10.2□□□□□ -0.78
SEC24D-209ENST00000509818 ANO3Q9BYT9 981 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 GTPBP4Q9BZE4 634 aaKnown RBP10.2□□□□□ -0.78
SEC24D-209ENST00000509818 LRWD1Q9UFC0 647 aa10.2□□□□□ -0.78
SEC24D-209ENST00000509818 FEM1BQ9UK73 627 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms