RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 CLEC4DQ8WXI8 215 aa14.8□□□□□ -0.04
KDM3B-206ENST00000509468 RNPC3Q96LT9 517 aaKnown RBP14.8□□□□□ -0.04
KDM3B-206ENST00000509468 PURBQ96QR8 312 aaKnown RBP14.8□□□□□ -0.04
KDM3B-206ENST00000509468 SEMA6BQ9H3T3 888 aa14.8□□□□□ -0.04
KDM3B-206ENST00000509468 CNNM2Q9H8M5 875 aa14.8□□□□□ -0.04
KDM3B-206ENST00000509468 TBX21Q9UL17 535 aa14.8□□□□□ -0.04
KDM3B-206ENST00000509468 WDR19Q8NEZ3 1342 aa14.8□□□□□ -0.04
KDM3B-206ENST00000509468 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.79□□□□□ -0.04
KDM3B-206ENST00000509468 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.79□□□□□ -0.04
KDM3B-206ENST00000509468 NEDD4P46934 1319 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 EPHB4P54760 987 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.041e-7■■■■■ 29.8
KDM3B-206ENST00000509468 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 LAMA4Q16363 1823 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 FBXO16Q8IX29 292 aaPredicted RBP14.79□□□□□ -0.04
KDM3B-206ENST00000509468 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
KDM3B-206ENST00000509468 LCTP09848 1927 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 RBM47A0AV96 593 aaKnown RBP14.78□□□□□ -0.04
KDM3B-206ENST00000509468 B4E1Z4 1266 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 CD4P01730 458 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 RPS6P62753 249 aaKnown RBP14.78□□□□□ -0.04
KDM3B-206ENST00000509468 PDE4DQ08499 809 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 ASPRV1Q53RT3 343 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 BRDTQ58F21 947 aaPredicted RBP14.78□□□□□ -0.04
KDM3B-206ENST00000509468 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 UBAC1Q9BSL1 405 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 UBA5Q9GZZ9 404 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
KDM3B-206ENST00000509468 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.05
KDM3B-206ENST00000509468 KPNA6O60684 536 aa14.77□□□□□ -0.05
KDM3B-206ENST00000509468 PARP1P09874 1014 aaKnown RBP14.77□□□□□ -0.05
KDM3B-206ENST00000509468 CPT1AP50416 773 aa14.77□□□□□ -0.05
KDM3B-206ENST00000509468 MCF2L2Q86YR7 1114 aa14.77□□□□□ -0.05
KDM3B-206ENST00000509468 ENAHQ8N8S7 591 aaPredicted RBP14.77□□□□□ -0.05
KDM3B-206ENST00000509468 GUCD1Q96NT3 240 aa14.77□□□□□ -0.05
KDM3B-206ENST00000509468 GPHNQ9NQX3 736 aaPredicted RBP14.77□□□□□ -0.05
KDM3B-206ENST00000509468 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
KDM3B-206ENST00000509468 MYH6P13533 1939 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 COL6A3P12111 3177 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 ABCB11O95342 1321 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 LRRC37A2A6NM11 1700 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 TMEM265A0A087WTH1 108 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 DLL1O00548 723 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 TRDNQ13061 729 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 USH1GQ495M9 461 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 TTC22Q5TAA0 569 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 ADGRF4Q8IZF3 695 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
KDM3B-206ENST00000509468 CDX2Q99626 313 aaPredicted RBP14.76□□□□□ -0.05
KDM3B-206ENST00000509468 MRPL11Q9Y3B7 192 aaKnown RBP14.76□□□□□ -0.05
KDM3B-206ENST00000509468 GRIN2DO15399 1336 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 TNKSO95271 1327 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 RAD50Q92878 1312 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 DHX16O60231 1041 aaKnown RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 SUPT20HL2P0C7V6 817 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 CSF2RAP15509 400 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 EDNRBP24530 442 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 CDC37Q16543 378 aaPredicted RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 TMEM63BQ5T3F8 832 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 IFIT1BQ5T764 474 aaKnown RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 SLC30A10Q6XR72 485 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 NSUN6Q8TEA1 469 aaKnown RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.75□□□□□ -0.055e-10■□□□□ 10.8
KDM3B-206ENST00000509468 MTG1Q9BT17 334 aaPredicted RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 PPP1R12CQ9BZL4 782 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 VAT1LQ9HCJ6 419 aa14.75□□□□□ -0.05
KDM3B-206ENST00000509468 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
KDM3B-206ENST00000509468 MYL3P08590 195 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 TXNP10599 105 aaKnown RBP14.74□□□□□ -0.05
KDM3B-206ENST00000509468 PDE4AP27815 886 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 TRAF1Q13077 416 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 PPP2R5BQ15173 497 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 TMEM240Q5SV17 173 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 C16orf59Q7L2K0 433 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 FBXO11Q86XK2 927 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 RPUSD2Q8IZ73 545 aaKnown RBP14.74□□□□□ -0.05
KDM3B-206ENST00000509468 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 TRPV6Q9H1D0 765 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
KDM3B-206ENST00000509468 CPVLQ9H3G5 476 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 IL23AQ9NPF7 189 aa14.74□□□□□ -0.05
KDM3B-206ENST00000509468 B4GALT4O60513 344 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 FGBP02675 491 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 CYP2C18P33260 490 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 PSMC6P62333 389 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
KDM3B-206ENST00000509468 STXBP2Q15833 593 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 TTYH1Q9H313 450 aaPredicted RBP14.73□□□□□ -0.05
KDM3B-206ENST00000509468 JMJD4Q9H9V9 463 aa14.73□□□□□ -0.05
KDM3B-206ENST00000509468 MAP3K20Q9NYL2 800 aaKnown RBP14.73□□□□□ -0.05
KDM3B-206ENST00000509468 ERICH2A1L162 156 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms