RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 USH1GQ495M9 461 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
SIL1-212ENST00000509400 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
SIL1-212ENST00000509400 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
SIL1-212ENST00000509400 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
SIL1-212ENST00000509400 JAK2O60674 1132 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 COL6A1P12109 1028 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
SIL1-212ENST00000509400 CCNA1P78396 465 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 PKN1Q16512 942 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 FBXO11Q86XK2 927 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 UBE2OQ9C0C9 1292 aaKnown RBP13.12□□□□□ -0.31
SIL1-212ENST00000509400 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
SIL1-212ENST00000509400 RLFQ13129 1914 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 CPLX1O14810 134 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 SLC25A27O95847 323 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 FDPSP14324 419 aaKnown RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 CACNB2Q08289 660 aaPredicted RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 CCL14Q16627 93 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 LHX8Q68G74 356 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 GPR142Q7Z601 462 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 USP6NLQ92738 828 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
SIL1-212ENST00000509400 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 AMNQ9BXJ7 453 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 SH2B1Q9NRF2 756 aaPredicted RBP13.11□□□□□ -0.31
SIL1-212ENST00000509400 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
SIL1-212ENST00000509400 NFIBO00712 420 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 OPLAHO14841 1288 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 COBLO75128 1261 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 PTPREP23469 700 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
SIL1-212ENST00000509400 MAPK4P31152 587 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 MCM2P49736 904 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
SIL1-212ENST00000509400 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 NSUN7Q8NE18 718 aaKnown RBP13.1□□□□□ -0.31
SIL1-212ENST00000509400 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 SNX21Q969T3 373 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 DDX11Q96FC9 970 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 PURBQ96QR8 312 aaKnown RBP13.1□□□□□ -0.31
SIL1-212ENST00000509400 MROH8Q9H579 483 aa13.1□□□□□ -0.31
SIL1-212ENST00000509400 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
SIL1-212ENST00000509400 XRCC5P13010 732 aaKnown RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 MORN1Q5T089 497 aa13.09□□□□□ -0.31
SIL1-212ENST00000509400 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
SIL1-212ENST00000509400 CHST13Q8NET6 341 aa13.09□□□□□ -0.31
SIL1-212ENST00000509400 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
SIL1-212ENST00000509400 RNF26Q9BY78 433 aaPredicted RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
SIL1-212ENST00000509400 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 STXBP3O00186 592 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 ADAMTS3O15072 1205 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 PGK2P07205 417 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 SCG2P13521 617 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
SIL1-212ENST00000509400 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 MMP19Q99542 508 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
SIL1-212ENST00000509400 GJB4Q9NTQ9 266 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
SIL1-212ENST00000509400 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
SIL1-212ENST00000509400 ABCB11O95342 1321 aa13.08□□□□□ -0.32
SIL1-212ENST00000509400 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 STRNO43815 780 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 DEXIO95424 95 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 FCER1AP12319 257 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 ADORA2AP29274 412 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 COPB2P35606 906 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 FOSBP53539 338 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 CUL4AQ13619 759 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 GRB14Q14449 540 aa13.07□□□□□ -0.32
SIL1-212ENST00000509400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
SIL1-212ENST00000509400 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms