RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 A6NHS1 94 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 DTNBO60941 627 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TSC22D2O75157 780 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 RPLP1P05386 114 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CFHP08603 1231 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 HOXC9P31274 260 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PPARGP37231 505 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TECP42680 631 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 KRT83P78385 493 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ICA1Q05084 483 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TBX2Q13207 712 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PGBD2Q6P3X8 592 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CENPQQ7L2Z9 268 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PCGF5Q86SE9 256 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 LRRC47Q8N1G4 583 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 KIAA1524Q8TCG1 905 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CITED4Q96RK1 184 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 APBA2Q99767 749 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 XPO4Q9C0E2 1151 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 TUBGCP6Q96RT7 1819 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 IRAK2O43187 625 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 JMJD7P0C870 316 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 IREB2P48200 963 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CLCN6P51797 869 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 RNASELQ05823 741 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PIN1Q13526 163 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 DGKZQ13574 1117 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 C6orf132Q5T0Z8 1188 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 KLHL10Q6JEL2 608 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ST13P5Q8NFI4 369 aaPredicted RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 GOLGA1Q92805 767 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 VPS37BQ9H9H4 285 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ARHGEF3Q9NR81 526 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PAPOLBQ9NRJ5 636 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 AK5Q9Y6K8 562 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ANKRD18BA2A2Z9 1011 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 SCAND1P57086 179 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 FUT2Q10981 343 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 NOL9Q5SY16 702 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 ZCCHC8Q6NZY4 707 aaKnown RBP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 NFATC2IPQ8NCF5 419 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CHMP4CQ96CF2 233 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 YY1AP1Q9H869 796 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 KIAA1586Q9HCI6 787 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 CD248Q9HCU0 757 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 IGSF5Q9NSI5 407 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 EXOC1Q9NV70 894 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 LUZP4Q9P127 313 aa4.37□□□□□ -1.71
NEDD4-209ENST00000508871 NPHP3Q7Z494 1330 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 NDC80O14777 642 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RHOXF2BP0C7M4 288 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 UTP14CQ5TAP6 766 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 ANKRD24Q8TF21 1146 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 DIS3LQ8TF46 1054 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RHOXF2Q9BQY4 288 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 UBN1Q9NPG3 1134 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RIC8AQ9NPQ8 531 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 COQ3Q9NZJ6 369 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 KCNG1Q9UIX4 513 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 SH3BGRL2Q9UJC5 107 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TRHDEQ9UKU6 1024 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CPP00450 1065 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 THEGLP0DJG4 465 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CD46P15529 392 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RXRAP19793 462 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RIPK4P57078 832 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 EVCP57679 992 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TSTA3Q13630 321 aaPredicted RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RASA3Q14644 834 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 ADCK5Q3MIX3 580 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 PLEKHG4Q58EX7 1191 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 MTDHQ86UE4 582 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 DDX11Q96FC9 970 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 COPRSQ9NQ92 184 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RGS12O14924 1447 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TRIM64CA6NLI5 447 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 hCG_1984214I3L0E3 225 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TREHO43280 583 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 APOL3O95236 402 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 NUP62P37198 522 aaPredicted RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 NPTX2P47972 431 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RARSP54136 660 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 DMTNQ08495 405 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 KRT32Q14532 448 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TEX35Q5T0J7 233 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 TMEM214Q6NUQ4 689 aaKnown RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 LIX1LQ8IVB5 337 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 SLC44A2Q8IWA5 706 aaPredicted RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 USP33Q8TEY7 942 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CSRNP1Q96S65 589 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 BRD8Q9H0E9 1235 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
NEDD4-209ENST00000508871 ITM2BQ9Y287 266 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms