RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CPT1AP50416 773 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 PDE4DQ08499 809 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 TRDNQ13061 729 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 TRAF1Q13077 416 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 C9orf50Q5SZB4 431 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 MCF2L2Q86YR7 1114 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 SLC43A3Q8NBI5 491 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 LCTP09848 1927 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 ABCB11O95342 1321 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 NEDD4P46934 1319 aa15.91■□□□□ 0.14
CCHCR1-227ENST00000508852 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 RBM47A0AV96 593 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 NFIBO00712 420 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 SUPT20HL2P0C7V6 817 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 CALML3P27482 149 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 ITGA7Q13683 1181 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 FBXO16Q8IX29 292 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 FAM126BQ8IXS8 530 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 SCFD2Q8WU76 684 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 CLEC4DQ8WXI8 215 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 WDR11Q9BZH6 1224 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 GPHNQ9NQX3 736 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 MYH6P13533 1939 aa15.9■□□□□ 0.14
CCHCR1-227ENST00000508852 CD4P01730 458 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 PARP1P09874 1014 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 ITGB8P26012 769 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 RPS6P62753 249 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 BEX3Q00994 111 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 CXCL17Q6UXB2 119 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 RASGRP2Q7LDG7 609 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 SAMD3Q8N6K7 520 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 ZKSCAN3Q9BRR0 538 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 ZSWIM5Q9P217 1185 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 ASTN1O14525 1302 aa15.89■□□□□ 0.13
CCHCR1-227ENST00000508852 B4E1Z4 1266 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 EDNRBP24530 442 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 PPP2R5BQ15173 497 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 IFIT1BQ5T764 474 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 TTC22Q5TAA0 569 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 ENAHQ8N8S7 591 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 IWS1Q96ST2 819 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 SEMA6BQ9H3T3 888 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 PDGFCQ9NRA1 345 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 MAP3K20Q9NYL2 800 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 SUPT16HQ9Y5B9 1047 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 TNKSO95271 1327 aa15.88■□□□□ 0.13
CCHCR1-227ENST00000508852 COL6A3P12111 3177 aa15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 ERICH2A1L162 156 aa15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 TTLL4Q14679 1199 aa15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 RPUSD2Q8IZ73 545 aaKnown RBP15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 NSUN6Q8TEA1 469 aaKnown RBP15.87■□□□□ 0.13
CCHCR1-227ENST00000508852 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 GOLGA8HP0CJ92 632 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 SART3Q15020 963 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 USH1GQ495M9 461 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 SLC30A10Q6XR72 485 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 FBXO11Q86XK2 927 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 ADGRF4Q8IZF3 695 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 OR6J1Q8NGC5 347 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 GUCD1Q96NT3 240 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 MTG1Q9BT17 334 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 HIPK3Q9H422 1215 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 IL23AQ9NPF7 189 aa15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 LAMA2P24043 3122 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-227ENST00000508852 PFKMP08237 780 aa15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 PTPN11Q06124 597 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 STXBP2Q15833 593 aa15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 AMNQ9BXJ7 453 aa15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 UBA5Q9GZZ9 404 aa15.85■□□□□ 0.13
CCHCR1-227ENST00000508852 A6NJR5 290 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 TXNP10599 105 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 CSF2RAP15509 400 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 EPHB4P54760 987 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 PURAQ00577 322 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 TMEM240Q5SV17 173 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 NFRKBQ6P4R8 1299 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 PURBQ96QR8 312 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.136e-7■■■□□ 16.7
CCHCR1-227ENST00000508852 PPP1R12CQ9BZL4 782 aa15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 ALDH8A1Q9H2A2 487 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-227ENST00000508852 FGBP02675 491 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 MYL3P08590 195 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 QRICH1Q2TAL8 776 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 KCNV1Q6PIU1 500 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 HERVK_113Q902F9 699 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 FAM161BQ96MY7 647 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 RMDN3Q96TC7 470 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms