RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 KREMEN1Q96MU8 473 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 SLC9A7Q96T83 725 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 SRRTQ9BXP5 876 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 MKNK2Q9HBH9 465 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 ANGEL1Q9UNK9 670 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 MRVI1Q9Y6F6 885 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 ALS2Q96Q42 1657 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 ABCA3Q99758 1704 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 GLI3P10071 1580 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 PPIP5K1Q6PFW1 1433 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TMEM265A0A087WTH1 108 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 ACRP10323 421 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 DNAJA1P31689 397 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TNK2Q07912 1038 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 LILRA6Q6PI73 481 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 LSRQ86X29 649 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TMEM192Q8IY95 271 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 FLCNQ8NFG4 579 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 BCL7CQ8WUZ0 217 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 SEC16BQ96JE7 1060 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 HRASLS5Q96KN8 279 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 Q96M66 194 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 FBXL18Q96ME1 805 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TINF2Q9BSI4 451 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 BTG4Q9NY30 223 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 CCDC39Q9UFE4 941 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 CAPN6Q9Y6Q1 641 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TOPAZ1Q8N9V7 1692 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 ITSN1Q15811 1721 aa4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 ROCK2O75116 1388 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-226ENST00000508635 TRPM1Q7Z4N2 1603 aa4.9□□□□□ -1.62
UBE2D3-226ENST00000508635 PLCH1Q4KWH8 1693 aa4.9□□□□□ -1.62
UBE2D3-226ENST00000508635 NWD2Q9ULI1 1742 aa4.9□□□□□ -1.62
UBE2D3-226ENST00000508635 CRYBG1Q9Y4K1 1723 aa4.9□□□□□ -1.62
UBE2D3-226ENST00000508635 WASH4PA8MWX3 477 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 B8ZZF3 427 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 TNFRSF10CO14798 259 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 CLEC3AO75596 197 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 SSBP05455 408 aaKnown RBP eCLIP4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 ZNF865P0CJ78 1059 aaPredicted RBP4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 ZYXQ15942 572 aaKnown RBP4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 PPP2R5EQ16537 467 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 SPRED2Q7Z698 418 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 RNF141Q8WVD5 230 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 SHDQ96IW2 340 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 SLC6A18Q96N87 628 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.9□□□□□ -1.635e-7■■■■□ 24.9
UBE2D3-226ENST00000508635 PRDM11Q9NQV5 511 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 FAM86C1Q9NVL1 165 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 ZSWIM5Q9P217 1185 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 SLC5A6Q9Y289 635 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 EVC2Q86UK5 1308 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 KIAA0232Q92628 1395 aa4.9□□□□□ -1.63
UBE2D3-226ENST00000508635 QRICH2Q9H0J4 1663 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 COL14A1Q05707 1796 aaKnown RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 CD8BP10966 210 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 KIR3DL1P43629 444 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 GIPRP48546 466 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 ZC3H6P61129 1189 aaKnown RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 ARID5AQ03989 594 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 PRKCQQ04759 706 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 CHRNA2Q15822 529 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 NAALADL2Q58DX5 795 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 NBPF12Q5TAG4 269 aaPredicted RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 TDRD10Q5VZ19 366 aaKnown RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 UNC5AQ6ZN44 842 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 C22orf34Q6ZV56 151 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 TP53INP2Q8IXH6 220 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 DTWD2Q8NBA8 298 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 RBBP8NLQ8NC74 664 aaPredicted RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 UBE2FQ969M7 185 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 COX4I2Q96KJ9 171 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 TM9SF2Q99805 663 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 TNKS2Q9H2K2 1166 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 ATP13A1Q9HD20 1204 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 VAV3Q9UKW4 847 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 KCNH3Q9ULD8 1083 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 ST14Q9Y5Y6 855 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 USP19O94966 1318 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 SPATA31A5Q5VU36 1347 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 SPATA31A7Q8IWB4 1347 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 CLSPNQ9HAW4 1339 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 BRD4O60885 1362 aaPredicted RBP4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 TONSLQ96HA7 1378 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 NRAPQ86VF7 1730 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 USP6P35125 1406 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 SSH2Q76I76 1423 aa4.89□□□□□ -1.63
UBE2D3-226ENST00000508635 FARP2O94887 1054 aaPredicted RBP4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 GCP02774 474 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 PRNPP04156 253 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 GUCY2CP25092 1073 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 CLCN7P51798 805 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 IKZF1Q13422 519 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 ZNF648Q5T619 568 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms