RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TMEM62Q0P6H9 643 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 NR1I3Q14994 352 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 KRTAP19-4Q3LI73 84 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 BICRALQ6AI39 1079 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 NKX2-4Q9H2Z4 354 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 CLEC1BQ9P126 229 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 N4BP3O15049 544 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 KLF4O43474 513 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 PPP1R11O60927 126 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 CYBBP04839 570 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 THBDP07204 575 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 MAPKAPK2P49137 400 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 SSPNQ14714 243 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 SV2CQ496J9 727 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 MBLAC2Q68D91 279 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 PAQR3Q6TCH7 311 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 ZSCAN18Q8TBC5 510 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 BTN2A2Q8WVV5 523 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 CYP26B1Q9NR63 512 aa8.52□□□□□ -1.05
TOPBP1-206ENST00000508524 TRBV23OR9-2A0A075B6M9 112 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 GLI4P10075 376 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 PLS3P13797 630 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 MTA3Q9BTC8 594 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 RWDD3Q9Y3V2 267 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 HCFC2Q9Y5Z7 792 aa8.51□□□□□ -1.05
TOPBP1-206ENST00000508524 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 C7orf72A4D263 438 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 IRS4O14654 1257 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 SLC10A6Q3KNW5 377 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 CIAPIN1Q6FI81 312 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 ZC3H14Q6PJT7 736 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 IGDCC3Q8IVU1 814 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 NPLOC4Q8TAT6 608 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 FRS2Q8WU20 508 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 MZB1Q8WU39 189 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 MMP19Q99542 508 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 GULP1Q9UBP9 304 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 CNOT6Q9ULM6 557 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 PCDHA5Q9Y5H7 936 aa8.5□□□□□ -1.05
TOPBP1-206ENST00000508524 NUAK1O60285 661 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 ZSCAN22P10073 491 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 DDR2Q16832 855 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 LZTR1Q8N653 840 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 KCTD3Q9Y597 815 aa8.49□□□□□ -1.05
TOPBP1-206ENST00000508524 CAPNS1P04632 268 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 PI3P19957 117 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 SIAH1Q8IUQ4 282 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 IRF2BPLQ9H1B7 796 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 EPB41L4AQ9HCS5 686 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 LRP2BPQ9P2M1 347 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 R3HCC1Q9Y3T6 440 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 IRAK3Q9Y616 596 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 IRS2Q9Y4H2 1338 aa8.48□□□□□ -1.05
TOPBP1-206ENST00000508524 ZC3H12DA2A288 527 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 NPHS1O60500 1241 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 SCG5P05408 212 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 FBLN1P23142 703 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 HOXC12P31275 282 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 INF2Q27J81 1249 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 TMEFF1Q8IYR6 380 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 PANK1Q8TE04 598 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 DPF3Q92784 378 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 EPN3Q9H201 632 aa8.47□□□□□ -1.05
TOPBP1-206ENST00000508524 ARNTLO00327 626 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 NCKAP1LP55160 1127 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 PRR5P85299 388 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 SF1Q15637 639 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 CCDC103Q8IW40 242 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 KREMEN2Q8NCW0 462 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 RXFP1Q9HBX9 757 aa8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 TMEFF2Q9UIK5 374 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-206ENST00000508524 IGFBP6P24592 240 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 GFRA1P56159 465 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 RAB33AQ14088 237 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 ZNF385BQ569K4 471 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 CABP7Q86V35 215 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 NETO2Q8NC67 525 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
TOPBP1-206ENST00000508524 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 RFXAPO00287 272 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 ECI1P42126 302 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 PRSS53Q2L4Q9 553 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 FBLN7Q53RD9 439 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 E4F1Q66K89 784 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms