RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 GNA11P29992 359 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 CRHR2Q13324 411 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 PWP2Q15269 919 aaKnown RBP9.95□□□□□ -0.82
USP46-207ENST00000508499 WWC2Q6AWC2 1192 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
USP46-207ENST00000508499 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 JMYQ8N9B5 988 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 GPRC5AQ8NFJ5 357 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 TXNRD2Q9NNW7 524 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 LRRC37A2A6NM11 1700 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 MYH7BA7E2Y1 1941 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 M0R2N6 131 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 OPLAHO14841 1288 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 STRNO43815 780 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 MMP1P03956 469 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
USP46-207ENST00000508499 CLK2P49760 499 aaKnown RBP9.94□□□□□ -0.82
USP46-207ENST00000508499 HSD17B4P51659 736 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 NPY5RQ15761 445 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 SNRNP48Q6IEG0 339 aaKnown RBP9.94□□□□□ -0.82
USP46-207ENST00000508499 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 HOMER1Q86YM7 354 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 MCF2L2Q86YR7 1114 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 FAM184AQ8NB25 1140 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 ALG1Q9BT22 464 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 MOV10L1Q9BXT6 1211 aaKnown RBP9.94□□□□□ -0.82
USP46-207ENST00000508499 VAT1LQ9HCJ6 419 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 RIC8AQ9NPQ8 531 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 CCPG1Q9ULG6 757 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 PFASO15067 1338 aa9.94□□□□□ -0.82
USP46-207ENST00000508499 U2AF2P26368 475 aaKnown RBP eCLIP9.93□□□□□ -0.82
USP46-207ENST00000508499 MAPK4P31152 587 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 HTRA3P83110 453 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 CLEC4DQ8WXI8 215 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 RNF166Q96A37 237 aaPredicted RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 SHISA4Q96DD7 197 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 C8orf76Q96K31 380 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 FOXP1Q9H334 677 aaPredicted RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 ACAD9Q9H845 621 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 RAVER2Q9HCJ3 691 aaKnown RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 C6orf50Q9HD87 102 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 RNF186Q9NXI6 227 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 ISY1Q9ULR0 285 aaKnown RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 CTDP1Q9Y5B0 961 aaPredicted RBP9.93□□□□□ -0.82
USP46-207ENST00000508499 FRMPD4Q14CM0 1322 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 KIAA1217Q5T5P2 1943 aa9.93□□□□□ -0.82
USP46-207ENST00000508499 DNAJC25-GNG10A0A024R161 153 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
USP46-207ENST00000508499 MEIS2O14770 477 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 FOSP01100 380 aaPredicted RBP9.92□□□□□ -0.82
USP46-207ENST00000508499 GNRH1P01148 92 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 SYT1P21579 422 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 NAPAP54920 295 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 AP3B2Q13367 1082 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
USP46-207ENST00000508499 TRIM29Q14134 588 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 Q3C1V9 767 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
USP46-207ENST00000508499 KRT40Q6A162 431 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 HEATR3Q7Z4Q2 680 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 ANKRD13CQ8N6S4 541 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 CUL5Q93034 780 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 DDX11Q96FC9 970 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
USP46-207ENST00000508499 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 WBP1LQ9NX94 342 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 PCDHA4Q9UN74 947 aa9.92□□□□□ -0.82
USP46-207ENST00000508499 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 SMCO2A6NFE2 343 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 STX6O43752 255 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 ERCC3P19447 782 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 PSEN1P49768 467 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 IRF5Q13568 498 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 CCDC174Q6PII3 467 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 CPXCR1Q8N123 301 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
USP46-207ENST00000508499 TNFRSF25Q93038 417 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 COA7Q96BR5 231 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 AIFM3Q96NN9 605 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 PSTPIP2Q9H939 334 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 BRMS1Q9HCU9 246 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 VPS54Q9P1Q0 977 aa9.91□□□□□ -0.82
USP46-207ENST00000508499 DIS3Q9Y2L1 958 aaKnown RBP9.91□□□□□ -0.82
USP46-207ENST00000508499 HOXC6P09630 235 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 ALAS1P13196 640 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 ADCY7P51828 1080 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 NLRP5P59047 1200 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 SNAP25P60880 206 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 NUCB2P80303 420 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 LACTBP83111 547 aaPredicted RBP9.9□□□□□ -0.82
USP46-207ENST00000508499 GRB14Q14449 540 aa9.9□□□□□ -0.82
USP46-207ENST00000508499 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms