RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SMTNP53814 917 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SLC7A5Q01650 507 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 GEN1Q17RS7 908 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SUGP1Q8IWZ8 645 aaKnown RBP7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 DHX40Q8IX18 779 aaKnown RBP7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 ANKRD13CQ8N6S4 541 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 KIFC2Q96AC6 838 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SDCCAG3Q96C92 435 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 CALR3Q96L12 384 aaKnown RBP7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 USP44Q9H0E7 712 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 TMEM232C9JQI7 657 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 DTNBO60941 627 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 APOEP02649 317 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 HSPD1P10809 573 aaKnown RBP7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 ABCB4P21439 1286 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 RAD23BP54727 409 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 KLC1Q07866 573 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 DCUN1D2Q6PH85 259 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 LRIG3Q6UXM1 1119 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SYT2Q8N9I0 419 aaPredicted RBP7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SUCLG2Q96I99 432 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 ABHD10Q9NUJ1 306 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 VPS54Q9P1Q0 977 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 KIF11P52732 1056 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 TIMM10P62072 90 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 DR1Q01658 176 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM69CQ0P6D2 419 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 SNX1Q13596 522 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 NYAP1Q6ZVC0 841 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 MIGA1Q8NAN2 632 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM212AQ96EL1 285 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 THOC1Q96FV9 657 aaKnown RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 L2HGDHQ9H9P8 463 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 ABCC12Q96J65 1359 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 MED23Q9ULK4 1368 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 PTCH1Q13635 1447 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 SYCP2Q9BX26 1530 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 BTBD18B2RXH4 712 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 GYG2O15488 501 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 EXOC3O60645 756 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 KRT3P12035 628 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 H2AFXP16104 143 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 EIF4A3P38919 411 aaKnown RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 VSNL1P62760 191 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 SPARCL1Q14515 664 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 TCP11X2Q5H9J9 407 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 RBM26Q5T8P6 1007 aaKnown RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 ARMCX5Q6P1M9 558 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 NBPF5PQ86XG9 351 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 MB21D1Q8N884 522 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 PLBD2Q8NHP8 589 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 MYL10Q9BUA6 226 aa7.96□□□□□ -1.14
UBE2D3-224ENST00000508474 FOXO3O43524 673 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 MX2P20592 715 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ADCY7P51828 1080 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 AP2B1P63010 937 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 PSMD2Q13200 908 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 RCN2Q14257 317 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 E4F1Q66K89 784 aaPredicted RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 BLIDQ8IZY5 108 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 AK8Q96MA6 479 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ANKRD2Q9GZV1 360 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 INHBAP08476 426 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 USP6NLQ92738 828 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 TEKT1Q969V4 418 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 CCT8L2Q96SF2 557 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 HAUS2Q9NVX0 235 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 DENND2AQ9ULE3 1009 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 USTQ9Y2C2 406 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 SRPRBQ9Y5M8 271 aaKnown RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ENO4A6NNW6 628 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 GIPC1O14908 333 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 EEF1DP29692 281 aaKnown RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 MAGOHP61326 146 aaKnown RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 KRT31Q15323 416 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 TMED2Q15363 201 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 RESP18Q5W5W9 173 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 MAP7D3Q8IWC1 876 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 FANCBQ8NB91 859 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 PGBD1Q96JS3 809 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 EYA1Q99502 592 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM96AQ9H5X1 160 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ANAPC5Q9UJX4 755 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ARHGEF10O15013 1369 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 POC1B-GALNT4F8VUJ3 575 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ZPR1O75312 459 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 FMNL1O95466 1100 aaPredicted RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 CXCR5P32302 372 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 PLA2G4AP47712 749 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 EXOC3L4Q17RC7 722 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ATG16L1Q676U5 607 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 PDZD8Q8NEN9 1154 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 DYDC2Q96IM9 177 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 NUDCD1Q96RS6 583 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms