RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ISCA1Q9BUE6 129 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 KANSL2Q9H9L4 492 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SERPINB13Q9UIV8 391 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ODF2LQ9ULJ1 636 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 HARSP12081 509 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FOSL2P15408 326 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 LMAN1P49257 510 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CDK8P49336 464 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SLC8A3P57103 927 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PSMD2Q13200 908 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 NMIQ13287 307 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PTGISQ16647 500 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PAN2Q504Q3 1202 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CHRDL2Q6WN34 429 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MAEAQ7L5Y9 396 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PRMT6Q96LA8 375 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FAM210AQ96ND0 272 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ACAD9Q9H845 621 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ECM29Q5VYK3 1845 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 DICER1Q9UPY3 1922 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CACNA1FO60840 1977 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 USP17L12C9JPN9 530 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 USP17L21D6R901 530 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 KRT2P35908 639 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 USP8P40818 1118 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ADCY7P51828 1080 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CEBPZQ03701 1054 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 COG2Q14746 738 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 NFKBIBQ15653 356 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 DGKDQ16760 1214 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 AAK1Q2M2I8 961 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TTC31Q49AM3 519 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FBXO46Q6PJ61 603 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 BLOC1S2Q6QNY1 142 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 HHIPL2Q6UWX4 724 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SND1Q7KZF4 910 aaKnown RBP eCLIP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PPFIBP1Q86W92 1011 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MICU3Q86XE3 530 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 NRBP2Q9NSY0 501 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CEP83Q9Y592 693 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ANKRD31Q8N7Z5 1873 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 GPAA1O43292 621 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 VAMP4O75379 141 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TOP1P11387 765 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 POLGP54098 1239 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FKBP1AP62942 108 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FOXO4P98177 505 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FPGSQ05932 587 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TKFCQ3LXA3 575 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 NCAPH2Q6IBW4 605 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 METTL23Q86XA0 190 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MNS1Q8NEH6 495 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TSNARE1Q96NA8 513 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 HAUS7Q99871 368 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 LZTS2Q9BRK4 669 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ABCC12Q96J65 1359 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ATAD5Q96QE3 1844 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 GOLGA6L10A6NI86 522 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TRIM27P14373 513 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ME1P48163 572 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PDAP1Q13442 181 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TFDP1Q14186 410 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 FAM102BQ5T8I3 360 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 C1orf228Q6PIY5 440 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC91Q7Z6B0 441 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TAX1BP1Q86VP1 789 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SCYL1Q96KG9 808 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 PCDHB12Q9Y5F1 795 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SLC4A7Q9Y6M7 1214 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 GSTTP1A0A1W2PQM5 241 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 DYNC1LI2O43237 492 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TBCAO75347 108 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 GH1P01241 217 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 SLC16A2P36021 539 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CCT2P78371 535 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MCM6Q14566 821 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 GNASQ5JWF2 1037 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 AKNAD1Q5T1N1 836 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 BEND3Q5T5X7 828 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MIER3Q7Z3K6 550 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF397Q8NF99 534 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 CTNNBL1Q8WYA6 563 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 MRRFQ96E11 262 aaKnown RBP3.31□□□□□ -1.88
NEDD4-208ENST00000508342 DYNLL2Q96FJ2 89 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 TCP11L1Q9NUJ3 509 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 AGTPBP1Q9UPW5 1226 aa3.31□□□□□ -1.88
NEDD4-208ENST00000508342 URB1O60287 2271 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 hCG_2014768A0A024R1R8 64 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 CXCL11O14625 94 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 KPNA6O60684 536 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 USP2O75604 605 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 FAM13AO94988 1023 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 EEF2P13639 858 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 THPOP40225 353 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ERVK-9P63128 1117 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ERVK-24P63145 666 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 RAB30Q15771 203 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 UVSSAQ2YD98 709 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms