RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DEPTORQ8TB45 409 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 FUBP3Q96I24 572 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CNDP2Q96KP4 475 aaKnown RBP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC7A5P2Q9GIP4 190 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CRTAC1Q9NQ79 661 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 GIT1Q9Y2X7 761 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ATAD2Q6PL18 1390 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 FZD9O00144 591 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 MT-CO1P00395 513 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CCND1P24385 295 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ZAP70P43403 619 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 MCM2P49736 904 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 EVCP57679 992 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ACAP1Q15027 740 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 WSCD2Q2TBF2 565 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 GALNTL5Q7Z4T8 443 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CRBNQ96SW2 442 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 NCAPGQ9BPX3 1015 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 TSPAN10Q9H1Z9 355 aaPredicted RBP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 TRPV4Q9HBA0 871 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CFDP1Q9UEE9 299 aaPredicted RBP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 TLR6Q9Y2C9 796 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 LRCH1Q9Y2L9 728 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 FYB1O15117 783 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TGDSO95455 350 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 HSPA5P11021 654 aaKnown RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 GZMAP12544 262 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PTK2Q05397 1052 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF252P-AS1Q0IIN9 211 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 AP1B1Q10567 949 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SCARB2Q14108 478 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 RASA2Q15283 850 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SEZ6Q53EL9 994 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 DSTYKQ6XUX3 929 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 BEND5Q7L4P6 421 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 DNAJB7Q7Z6W7 309 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TBC1D21Q8IYX1 336 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PCYOX1LQ8NBM8 494 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TDRD7Q8NHU6 1098 aaKnown RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC30A5Q8TAD4 765 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 C17orf50Q8WW18 174 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM81BQ96LP2 452 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TTC1Q99614 292 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 ALG1Q9BT22 464 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 DACT1Q9NYF0 836 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 POGKQ9P215 609 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TMEM98Q9Y2Y6 226 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 GPSM3Q9Y4H4 160 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 B4DLN1 442 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TISP43B9A030 160 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 B9A039 149 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 EIF3FO00303 357 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 USP2O75604 605 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 KIF20AO95235 890 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC10A3P09131 477 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC7A5Q01650 507 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 GRB10Q13322 594 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 TNIP1Q15025 636 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 MUM1L1Q5H9M0 696 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PDZD4Q76G19 769 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 ESX1Q8N693 406 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PDCD7Q8N8D1 485 aaKnown RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 USP13Q92995 863 aaPredicted RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PLD4Q96BZ4 506 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 NEK1Q96PY6 1258 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 SDF4Q9BRK5 362 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 ZWILCHQ9H900 591 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 EHMT1Q9H9B1 1298 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 PAPOLBQ9NRJ5 636 aaKnown RBP8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 C1orf112Q9NSG2 853 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 LRRC4BQ9NT99 713 aa8.48□□□□□ -1.05
PDGFRA-206ENST00000508170 CCDC196A0A1B0GTZ2 297 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 HOXC11O43248 304 aaPredicted RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 MAFO75444 373 aaPredicted RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 PRKD3O94806 890 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TBC1D8O95759 1140 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 APOA4P06727 396 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 HOXC12P31275 282 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 GRIK1P39086 918 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 HADHAP40939 763 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 POLR2FP61218 127 aaKnown RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 DCAF7P61962 342 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 FUT2Q10981 343 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms