RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 AMNQ9BXJ7 453 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 SEC63Q9UGP8 760 aaKnown RBP25.86■■□□□ 1.73
SNCB-204ENST00000508006 CCPG1Q9ULG6 757 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 CNTNAP5Q8WYK1 1306 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 STRNO43815 780 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 STK3Q13188 491 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 LHX8Q68G74 356 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 CCDC174Q6PII3 467 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 Q7L0L9 218 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 FBXO11Q86XK2 927 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 GTF3C6Q969F1 213 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 PIGSQ96S52 555 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 IVNS1ABPQ9Y6Y0 642 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 ZNF236Q9UL36 1845 aa25.85■■□□□ 1.73
SNCB-204ENST00000508006 COL6A1P12109 1028 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 ERCC3P19447 782 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 CNGA1P29973 690 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 SCRN1Q12765 414 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 ABRAQ8N0Z2 381 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 AGBL1Q96MI9 1066 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 RNF26Q9BY78 433 aaPredicted RBP25.84■■□□□ 1.73
SNCB-204ENST00000508006 NCOA5Q9HCD5 579 aaKnown RBP25.84■■□□□ 1.73
SNCB-204ENST00000508006 ABCB11O95342 1321 aa25.84■■□□□ 1.73
SNCB-204ENST00000508006 hCG_1984214I3L0E3 225 aa25.83■■□□□ 1.73
SNCB-204ENST00000508006 PRPF3O43395 683 aaKnown RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 SNAP25P60880 206 aa25.83■■□□□ 1.73
SNCB-204ENST00000508006 MDM2Q00987 491 aaPredicted RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 LRRC26Q2I0M4 334 aa25.83■■□□□ 1.73
SNCB-204ENST00000508006 NOL8Q76FK4 1167 aaKnown RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 NCAPG2Q86XI2 1143 aa25.83■■□□□ 1.73
SNCB-204ENST00000508006 HOMER1Q86YM7 354 aa25.83■■□□□ 1.73
SNCB-204ENST00000508006 CMTR1Q8N1G2 835 aaKnown RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 ZNF713Q8N859 430 aaPredicted RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 SENP6Q9GZR1 1112 aaPredicted RBP25.83■■□□□ 1.73
SNCB-204ENST00000508006 TRIM22Q8IYM9 498 aa25.82■■□□□ 1.72
SNCB-204ENST00000508006 CCDC82Q8N4S0 544 aa25.82■■□□□ 1.72
SNCB-204ENST00000508006 RIPK3Q9Y572 518 aa25.82■■□□□ 1.72
SNCB-204ENST00000508006 A0A0C4DFX4 3053 aa25.82■■□□□ 1.72
SNCB-204ENST00000508006 BAZ2BQ9UIF8 2168 aaKnown RBP25.82■■□□□ 1.72
SNCB-204ENST00000508006 SLC15A5A6NIM6 579 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 ALAS1P13196 640 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 PTPREP23469 700 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 AKAP17AQ02040 695 aaKnown RBP25.81■■□□□ 1.72
SNCB-204ENST00000508006 SAMD3Q8N6K7 520 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 TRERF1Q96PN7 1200 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 LBHD1Q9BQE6 289 aaPredicted RBP25.81■■□□□ 1.72
SNCB-204ENST00000508006 ACAD9Q9H845 621 aa25.81■■□□□ 1.72
SNCB-204ENST00000508006 MRPL11Q9Y3B7 192 aaKnown RBP25.81■■□□□ 1.72
SNCB-204ENST00000508006 ZNFX1Q9P2E3 1918 aaKnown RBP25.8■■□□□ 1.72
SNCB-204ENST00000508006 LARGE1O95461 756 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 FCER1AP12319 257 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 SSRP1Q08945 709 aaKnown RBP25.8■■□□□ 1.72
SNCB-204ENST00000508006 RGS22Q8NE09 1264 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 LLPHQ9BRT6 129 aaKnown RBP25.8■■□□□ 1.72
SNCB-204ENST00000508006 RNF146Q9NTX7 359 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 STXBP5LQ9Y2K9 1186 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 PCDHA1Q9Y5I3 950 aa25.8■■□□□ 1.72
SNCB-204ENST00000508006 V9GY48 417 aaPredicted RBP25.8■■□□□ 1.72
SNCB-204ENST00000508006 MSCO60682 206 aa25.79■■□□□ 1.72
SNCB-204ENST00000508006 TEX2Q8IWB9 1127 aa25.79■■□□□ 1.72
SNCB-204ENST00000508006 SNX21Q969T3 373 aa25.79■■□□□ 1.72
SNCB-204ENST00000508006 SMCHD1A6NHR9 2005 aa25.79■■□□□ 1.72
SNCB-204ENST00000508006 STK36Q9NRP7 1315 aa25.79■■□□□ 1.72
SNCB-204ENST00000508006 PPP1R11O60927 126 aaPredicted RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 CD2BP2O95400 341 aaKnown RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 GRB14Q14449 540 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 KCTD2Q14681 263 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 PFKFB3Q16875 520 aaPredicted RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 USH1GQ495M9 461 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 MCF2L2Q86YR7 1114 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 FAM177A1Q8N128 213 aaPredicted RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 NECAB1Q8N987 351 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 MTMR10Q9NXD2 777 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 MAP3K20Q9NYL2 800 aaKnown RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 FLRT1Q9NZU1 646 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 PRKAG2Q9UGJ0 569 aa25.78■■□□□ 1.72
SNCB-204ENST00000508006 DDX20Q9UHI6 824 aaKnown RBP25.78■■□□□ 1.72
SNCB-204ENST00000508006 DEXIO95424 95 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 SLC4A3P48751 1232 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 DPP9Q86TI2 863 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 PHKBQ93100 1093 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 TMX3Q96JJ7 454 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 SLC26A6Q9BXS9 759 aa25.77■■□□□ 1.72
SNCB-204ENST00000508006 DNAH12Q6ZR08 3092 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 SCG2P13521 617 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 ATN1P54259 1190 aaPredicted RBP25.76■■□□□ 1.71
SNCB-204ENST00000508006 PPP1R18Q6NYC8 613 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 CLEC4DQ8WXI8 215 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 MMP19Q99542 508 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 HOMER2Q9NSB8 354 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 SLC5A4Q9NY91 659 aa25.76■■□□□ 1.71
SNCB-204ENST00000508006 PLXNA1Q9UIW2 1896 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 CYP2C19P33261 490 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 GHRHRQ02643 423 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 MUM1L1Q5H9M0 696 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 ANKRD35Q8N283 1001 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 NPLOC4Q8TAT6 608 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 PIBF1Q8WXW3 757 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 WASF1Q92558 559 aa25.75■■□□□ 1.71
SNCB-204ENST00000508006 BARHL2Q9NY43 387 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms