RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 EPHB4P54760 987 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 TMEM63BQ5T3F8 832 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 CXCL17Q6UXB2 119 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 SLC30A10Q6XR72 485 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 ENAHQ8N8S7 591 aaPredicted RBP24.39■■□□□ 1.49
CLDND1-216ENST00000507944 CPVLQ9H3G5 476 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 STXBP5LQ9Y2K9 1186 aa24.39■■□□□ 1.49
CLDND1-216ENST00000507944 CABYRO75952 493 aa24.38■■□□□ 1.49
CLDND1-216ENST00000507944 RPS6P62753 249 aaKnown RBP24.38■■□□□ 1.49
CLDND1-216ENST00000507944 IRX6P78412 446 aaPredicted RBP24.38■■□□□ 1.49
CLDND1-216ENST00000507944 CNNM2Q9H8M5 875 aa24.38■■□□□ 1.49
CLDND1-216ENST00000507944 TLR3O15455 904 aaKnown RBP24.37■■□□□ 1.49
CLDND1-216ENST00000507944 USH1GQ495M9 461 aa24.37■■□□□ 1.49
CLDND1-216ENST00000507944 FAM126BQ8IXS8 530 aa24.37■■□□□ 1.49
CLDND1-216ENST00000507944 SLC17A8Q8NDX2 589 aa24.37■■□□□ 1.49
CLDND1-216ENST00000507944 TNKSO95271 1327 aa24.36■■□□□ 1.49
CLDND1-216ENST00000507944 DUSP28Q4G0W2 176 aa24.36■■□□□ 1.49
CLDND1-216ENST00000507944 RNPC3Q96LT9 517 aaKnown RBP24.36■■□□□ 1.49
CLDND1-216ENST00000507944 UBAC1Q9BSL1 405 aa24.36■■□□□ 1.49
CLDND1-216ENST00000507944 WDR11Q9BZH6 1224 aa24.36■■□□□ 1.49
CLDND1-216ENST00000507944 COL6A3P12111 3177 aa24.36■■□□□ 1.49
CLDND1-216ENST00000507944 RBM47A0AV96 593 aaKnown RBP24.35■■□□□ 1.49
CLDND1-216ENST00000507944 SMAD3P84022 425 aaKnown RBP24.35■■□□□ 1.49
CLDND1-216ENST00000507944 CDC37Q16543 378 aaPredicted RBP24.35■■□□□ 1.49
CLDND1-216ENST00000507944 ASPRV1Q53RT3 343 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 ZNF697Q5TEC3 545 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 MFSD5Q6N075 450 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 ADGRF4Q8IZF3 695 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 SLC43A3Q8NBI5 491 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 RGS22Q8NE09 1264 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 DNERQ8NFT8 737 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 FAM161BQ96MY7 647 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 MPHOSPH6Q99547 160 aaKnown RBP24.35■■□□□ 1.49
CLDND1-216ENST00000507944 RAD50Q92878 1312 aa24.35■■□□□ 1.49
CLDND1-216ENST00000507944 MYH6P13533 1939 aa24.34■■□□□ 1.49
CLDND1-216ENST00000507944 CD4P01730 458 aa24.34■■□□□ 1.49
CLDND1-216ENST00000507944 PARP1P09874 1014 aaKnown RBP24.34■■□□□ 1.49
CLDND1-216ENST00000507944 PDE4DQ08499 809 aa24.34■■□□□ 1.49
CLDND1-216ENST00000507944 ITGA7Q13683 1181 aa24.34■■□□□ 1.49
CLDND1-216ENST00000507944 RUFY2Q8WXA3 655 aa24.34■■□□□ 1.49
CLDND1-216ENST00000507944 LAMA2P24043 3122 aaKnown RBP24.34■■□□□ 1.49
CLDND1-216ENST00000507944 CHMLP26374 656 aa24.33■■□□□ 1.49
CLDND1-216ENST00000507944 IFIT1BQ5T764 474 aaKnown RBP24.33■■□□□ 1.49
CLDND1-216ENST00000507944 GUCD1Q96NT3 240 aa24.33■■□□□ 1.49
CLDND1-216ENST00000507944 SEZ6LQ9BYH1 1024 aa24.33■■□□□ 1.49
CLDND1-216ENST00000507944 VAT1LQ9HCJ6 419 aa24.33■■□□□ 1.49
CLDND1-216ENST00000507944 GRIN2DO15399 1336 aa24.33■■□□□ 1.48
CLDND1-216ENST00000507944 B4DLN1 442 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 DHX16O60231 1041 aaKnown RBP24.32■■□□□ 1.48
CLDND1-216ENST00000507944 EDNRBP24530 442 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 MRPL12P52815 198 aaKnown RBP24.32■■□□□ 1.48
CLDND1-216ENST00000507944 PPIGQ13427 754 aaKnown RBP eCLIP24.32■■□□□ 1.48
CLDND1-216ENST00000507944 TMEM199Q8N511 208 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 PPP1R12CQ9BZL4 782 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 MAF1Q9H063 256 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 ABCB11O95342 1321 aa24.32■■□□□ 1.48
CLDND1-216ENST00000507944 PSMC6P62333 389 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 TRDNQ13061 729 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 QRICH1Q2TAL8 776 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 CYB5R4Q7L1T6 521 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 TBC1D5Q92609 795 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLDND1-216ENST00000507944 SEMA6BQ9H3T3 888 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 JMJD4Q9H9V9 463 aa24.31■■□□□ 1.48
CLDND1-216ENST00000507944 CSF2RAP15509 400 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 PTH1RQ03431 593 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 SEC23AQ15436 765 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 FBXO11Q86XK2 927 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 OR6J1Q8NGC5 347 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 SCFD2Q8WU76 684 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 POLR3EQ9NVU0 708 aa24.3■■□□□ 1.48
CLDND1-216ENST00000507944 U3KPZ7 1027 aaPredicted RBP24.3■■□□□ 1.48
CLDND1-216ENST00000507944 MYO9BQ13459 2157 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 NKRFO15226 690 aaKnown RBP eCLIP24.29■■□□□ 1.48
CLDND1-216ENST00000507944 CPT1AP50416 773 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 PPP2R5BQ15173 497 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 C16orf59Q7L2K0 433 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 MCF2L2Q86YR7 1114 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 STAG2Q8N3U4 1231 aa24.29■■□□□ 1.48
CLDND1-216ENST00000507944 MRPL11Q9Y3B7 192 aaKnown RBP24.29■■□□□ 1.48
CLDND1-216ENST00000507944 BAZ2BQ9UIF8 2168 aaKnown RBP24.29■■□□□ 1.48
CLDND1-216ENST00000507944 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-216ENST00000507944 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-216ENST00000507944 MYL3P08590 195 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 CYP21A2P08686 494 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 CYP2C18P33260 490 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 TMEM240Q5SV17 173 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 SYTL5Q8TDW5 730 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-216ENST00000507944 TAAR1Q96RJ0 339 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 TRPV6Q9H1D0 765 aa24.28■■□□□ 1.48
CLDND1-216ENST00000507944 KLRF2D3W0D1 207 aa24.27■■□□□ 1.48
CLDND1-216ENST00000507944 TXNP10599 105 aaKnown RBP24.27■■□□□ 1.48
CLDND1-216ENST00000507944 PURAQ00577 322 aaKnown RBP24.27■■□□□ 1.48
CLDND1-216ENST00000507944 BRDTQ58F21 947 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-216ENST00000507944 TTYH1Q9H313 450 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-216ENST00000507944 HIPK3Q9H422 1215 aa24.27■■□□□ 1.48
CLDND1-216ENST00000507944 GPHNQ9NQX3 736 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-216ENST00000507944 SGSM2O43147 1006 aa24.26■■□□□ 1.47
CLDND1-216ENST00000507944 B4GALT4O60513 344 aa24.26■■□□□ 1.47
CLDND1-216ENST00000507944 ACRP10323 421 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms