RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 PITPNM1O00562 1244 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 TLL1O43897 1013 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
SNF8-205ENST00000507302 CA3P07451 260 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 ALAS1P13196 640 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 TFAP4Q01664 338 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 PDE4BQ07343 736 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 PPP4R3BQ5MIZ7 849 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 SLC9A7Q96T83 725 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 IL17RBQ9NRM6 502 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 TRMT13Q9NUP7 481 aaKnown RBP19.53■□□□□ 0.72
SNF8-205ENST00000507302 ICAM1P05362 532 aa19.52■□□□□ 0.72
SNF8-205ENST00000507302 MCCP23508 829 aa19.52■□□□□ 0.72
SNF8-205ENST00000507302 KIAA1211Q6ZU35 1233 aa19.52■□□□□ 0.72
SNF8-205ENST00000507302 COL4A4P53420 1690 aaPredicted RBP19.52■□□□□ 0.71
SNF8-205ENST00000507302 ZBBXA8MT70 800 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 RFXAPO00287 272 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 CYP2C9P11712 490 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 TAP1Q03518 808 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 PPARAQ07869 468 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 BTNL9Q6UXG8 535 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 KCTD1Q719H9 257 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 EEPD1Q7L9B9 569 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 PURBQ96QR8 312 aaKnown RBP19.51■□□□□ 0.71
SNF8-205ENST00000507302 RANBP17Q9H2T7 1088 aaKnown RBP19.51■□□□□ 0.71
SNF8-205ENST00000507302 BRWD1Q9NSI6 2320 aa19.51■□□□□ 0.71
SNF8-205ENST00000507302 FOXP2O15409 715 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 LPXNO60711 386 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 CPT1AP50416 773 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 ALDH5A1P51649 535 aaPredicted RBP19.5■□□□□ 0.71
SNF8-205ENST00000507302 PTPN11Q06124 597 aaPredicted RBP19.5■□□□□ 0.71
SNF8-205ENST00000507302 NFRKBQ6P4R8 1299 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 MTG1Q9BT17 334 aaPredicted RBP19.5■□□□□ 0.71
SNF8-205ENST00000507302 LRFN3Q9BTN0 628 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 WDR11Q9BZH6 1224 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 NACAP1Q9BZK3 213 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 EPHX3Q9H6B9 360 aa19.5■□□□□ 0.71
SNF8-205ENST00000507302 ADD3Q9UEY8 706 aaKnown RBP19.5■□□□□ 0.71
SNF8-205ENST00000507302 A6NJR5 290 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 GTPBP6O43824 516 aaPredicted RBP19.49■□□□□ 0.71
SNF8-205ENST00000507302 APPP05067 770 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 IQCF3P0C7M6 154 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 ACTN1P12814 892 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 MICALL1Q8N3F8 863 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 CCPG1Q9ULG6 757 aa19.49■□□□□ 0.71
SNF8-205ENST00000507302 TRIP12Q14669 1992 aaPredicted RBP19.48■□□□□ 0.71
SNF8-205ENST00000507302 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
SNF8-205ENST00000507302 FGRP09769 529 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 EDNRBP24530 442 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 SNAP25P60880 206 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 BAATQ14032 418 aaPredicted RBP19.48■□□□□ 0.71
SNF8-205ENST00000507302 NBPF20Q3BBV1 942 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 NSMFQ6X4W1 530 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 RASGRP2Q7LDG7 609 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 DEFB128Q7Z7B8 93 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 HERC6Q8IVU3 1022 aa19.48■□□□□ 0.71
SNF8-205ENST00000507302 SEC62Q99442 399 aaKnown RBP19.48■□□□□ 0.71
SNF8-205ENST00000507302 PIEZO1Q92508 2521 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 NKRFO15226 690 aaKnown RBP eCLIP19.47■□□□□ 0.71
SNF8-205ENST00000507302 KPNA6O60684 536 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 BAIAP3O94812 1187 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 IKQ13123 557 aaPredicted RBP19.47■□□□□ 0.71
SNF8-205ENST00000507302 LRRFIP1Q32MZ4 808 aaKnown RBP19.47■□□□□ 0.71
SNF8-205ENST00000507302 ZMYM1Q5SVZ6 1142 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 KRT40Q6A162 431 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 DCAF4Q8WV16 495 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 NAPBQ9H115 298 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 C11orf16Q9NQ32 467 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 LMCD1Q9NZU5 365 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 ANAPC4Q9UJX5 808 aa19.47■□□□□ 0.71
SNF8-205ENST00000507302 NFIBO00712 420 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 NMT2O60551 498 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 GPR37L1O60883 481 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 GRB10Q13322 594 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 GPNMBQ14956 572 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 CLEC4DQ8WXI8 215 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 HLA-CQ95604 372 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 GPATCH3Q96I76 525 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 CTAGE1Q96RT6 745 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 CERS4Q9HA82 394 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 STX8Q9UNK0 236 aa19.46■□□□□ 0.71
SNF8-205ENST00000507302 RBL2Q08999 1139 aa19.45■□□□□ 0.7
SNF8-205ENST00000507302 SKIV2LQ15477 1246 aaKnown RBP19.45■□□□□ 0.7
SNF8-205ENST00000507302 OR6J1Q8NGC5 347 aa19.45■□□□□ 0.7
SNF8-205ENST00000507302 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
SNF8-205ENST00000507302 KHSRPQ92945 711 aaKnown RBP eCLIP19.45■□□□□ 0.78e-7■□□□□ 9
SNF8-205ENST00000507302 TTC41PQ6P2S7 1318 aa19.45■□□□□ 0.7
SNF8-205ENST00000507302 ORC4O43929 436 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 MYL3P08590 195 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 SPRED2Q7Z698 418 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 SESTD1Q86VW0 696 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 ARNTL2Q8WYA1 636 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 INCENPQ9NQS7 918 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 SIP14410 1827 aa19.44■□□□□ 0.7
SNF8-205ENST00000507302 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 KIF28PB7ZC32 967 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms