RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF697Q5TEC3 545 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 TMEM199Q8N511 208 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 POLR3EQ9NVU0 708 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 TNKSO95271 1327 aa16.86■□□□□ 0.29
HMGCS1-203ENST00000507004 CTAGE5O15320 804 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 KPNA6O60684 536 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 CALML3P27482 149 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 CPT1AP50416 773 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 RPS6P62753 249 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 PDE4DQ08499 809 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 IFIT1BQ5T764 474 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 MFSD5Q6N075 450 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 FBXO16Q8IX29 292 aaPredicted RBP16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 FAM126BQ8IXS8 530 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 ASTN1O14525 1302 aa16.85■□□□□ 0.29
HMGCS1-203ENST00000507004 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 ERICH2A1L162 156 aa16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 EDNRBP24530 442 aa16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 EEPD1Q7L9B9 569 aa16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 SAMD3Q8N6K7 520 aa16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 WDR11Q9BZH6 1224 aa16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 MAP3K20Q9NYL2 800 aaKnown RBP16.84■□□□□ 0.29
HMGCS1-203ENST00000507004 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 ITGA7Q13683 1181 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 SART3Q15020 963 aaKnown RBP16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 C9orf50Q5SZB4 431 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 SLC30A10Q6XR72 485 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 MTIF3Q9H2K0 278 aaKnown RBP16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.28
HMGCS1-203ENST00000507004 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 CD4P01730 458 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 SUPT20HL2P0C7V6 817 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 ITGB8P26012 769 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 PDE4AP27815 886 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 BEX3Q00994 111 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 TTLL4Q14679 1199 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 FBXO11Q86XK2 927 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 IWS1Q96ST2 819 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 UBA5Q9GZZ9 404 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 LRRC37A2A6NM11 1700 aa16.82■□□□□ 0.28
HMGCS1-203ENST00000507004 CHMLP26374 656 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 USH1GQ495M9 461 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 Q7L0L9 218 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 SLC17A8Q8NDX2 589 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 LAMA3Q16787 3333 aa16.81■□□□□ 0.28
HMGCS1-203ENST00000507004 SEC23AQ15436 765 aa16.8■□□□□ 0.28
HMGCS1-203ENST00000507004 QRICH1Q2TAL8 776 aa16.8■□□□□ 0.28
HMGCS1-203ENST00000507004 OR6J1Q8NGC5 347 aa16.8■□□□□ 0.28
HMGCS1-203ENST00000507004 MTG1Q9BT17 334 aaPredicted RBP16.8■□□□□ 0.28
HMGCS1-203ENST00000507004 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
HMGCS1-203ENST00000507004 SZT2Q5T011 3432 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 LCTP09848 1927 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 SGSM2O43147 1006 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 GHRHRQ02643 423 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 STXBP2Q15833 593 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 RPUSD2Q8IZ73 545 aaKnown RBP16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 SYTL5Q8TDW5 730 aaPredicted RBP16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
HMGCS1-203ENST00000507004 A6NJR5 290 aa16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 ZBTB5O15062 677 aa16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 CYP21A2P08686 494 aa16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 PURAQ00577 322 aaKnown RBP16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 IL23AQ9NPF7 189 aa16.78■□□□□ 0.28
HMGCS1-203ENST00000507004 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 PFKMP08237 780 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 EPHB4P54760 987 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 WTAPQ15007 396 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 ARHGEF16Q5VV41 709 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
HMGCS1-203ENST00000507004 RMDN3Q96TC7 470 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms