RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 HMGCRP04035 888 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 PGK2P07205 417 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 SCG2P13521 617 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
SFXN1-205ENST00000506963 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
SFXN1-205ENST00000506963 ST3GAL1Q11201 340 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 BAATQ14032 418 aaPredicted RBP11.23□□□□□ -0.61
SFXN1-205ENST00000506963 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 MORC4Q8TE76 937 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 ESYT2A0FGR8 921 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 ASTN1O14525 1302 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 DEXIO95424 95 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 STK3Q13188 491 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 CCL14Q16627 93 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 SLC9C1Q4G0N8 1177 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 SLC30A10Q6XR72 485 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 TRIM22Q8IYM9 498 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 DNERQ8NFT8 737 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
SFXN1-205ENST00000506963 PHKBQ93100 1093 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 ZNF333Q96JL9 665 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 SYNGAP1Q96PV0 1343 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
SFXN1-205ENST00000506963 TINF2Q9BSI4 451 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 SH3GLB2Q9NR46 395 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 FLRT1Q9NZU1 646 aa11.22□□□□□ -0.61
SFXN1-205ENST00000506963 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
SFXN1-205ENST00000506963 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.61
SFXN1-205ENST00000506963 MCM3APO60318 1980 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 FRMPD4Q14CM0 1322 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 STXBP3O00186 592 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
SFXN1-205ENST00000506963 ELNP15502 786 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 EDNRBP24530 442 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
SFXN1-205ENST00000506963 CNTN2Q02246 1040 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 SSRP1Q08945 709 aaKnown RBP11.21□□□□□ -0.61
SFXN1-205ENST00000506963 MFSD14CQ5VZR4 134 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 PIBF1Q8WXW3 757 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 TBC1D5Q92609 795 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SFXN1-205ENST00000506963 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 ZMYND12Q9H0C1 365 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 GLT8D2Q9H1C3 349 aa11.21□□□□□ -0.61
SFXN1-205ENST00000506963 ASB14A6NK59 587 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 GCOM1H8Y6P7 765 aaPredicted RBP11.2□□□□□ -0.62
SFXN1-205ENST00000506963 MEIS2O14770 477 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 CFBP00751 764 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 INHAP05111 366 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 POLR2MP0CAP2 368 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 CAPN2P17655 700 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 UBXN2AP68543 259 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
SFXN1-205ENST00000506963 HEATR3Q7Z4Q2 680 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 NSUN7Q8NE18 718 aaKnown RBP11.2□□□□□ -0.62
SFXN1-205ENST00000506963 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 SH3TC2Q8TF17 1288 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 CCDC12Q8WUD4 166 aaPredicted RBP11.2□□□□□ -0.62
SFXN1-205ENST00000506963 PSTPIP2Q9H939 334 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 COL20A1Q9P218 1284 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 LRRC37A2A6NM11 1700 aa11.2□□□□□ -0.62
SFXN1-205ENST00000506963 HTTP42858 3142 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 B4DLN1 442 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 CYBAP13498 195 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 FDPSP14324 419 aaKnown RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 CALML3P27482 149 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 MRPL12P52815 198 aaKnown RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 NAPAP54920 295 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 CACNB2Q08289 660 aaPredicted RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 ARMCX2Q7L311 632 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 NSUN6Q8TEA1 469 aaKnown RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 WASF1Q92558 559 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 CUL5Q93034 780 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 SNX21Q969T3 373 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 SHISA4Q96DD7 197 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 IWS1Q96ST2 819 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 KATNBL1Q9H079 304 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
SFXN1-205ENST00000506963 PAK6Q9NQU5 681 aaPredicted RBP11.19□□□□□ -0.62
SFXN1-205ENST00000506963 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms