RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 C7orf72A4D263 438 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 ZNF503-AS2A6NEH8 195 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 L1CAMP32004 1257 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 KCNAB2Q13303 367 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 KIR3DS1Q14943 382 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 NTRK3Q16288 839 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 INF2Q27J81 1249 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 ZC3H12BQ5HYM0 836 aaKnown RBP4.43□□□□□ -1.7
GYPB-207ENST00000506679 IQCEQ6IPM2 695 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 Q8N1Y9 231 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 KISS1RQ969F8 398 aaPredicted RBP4.43□□□□□ -1.7
GYPB-207ENST00000506679 MRFAP1L1Q96HT8 127 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 TNFRSF12AQ9NP84 129 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 IMPACTQ9P2X3 320 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 TAF6LQ9Y6J9 622 aa4.43□□□□□ -1.7
GYPB-207ENST00000506679 MEFVO15553 781 aaPredicted RBP4.42□□□□□ -1.7
GYPB-207ENST00000506679 PRODHO43272 600 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 PPP1R11O60927 126 aaPredicted RBP4.42□□□□□ -1.7
GYPB-207ENST00000506679 C6orf222P0C671 652 aaPredicted RBP4.42□□□□□ -1.7
GYPB-207ENST00000506679 MSL3P1P0C860 447 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 PNLIPP16233 465 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 ECI1P42126 302 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 ERVFRD-1P60508 538 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 MVKQ03426 396 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 LAPTM5Q13571 262 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 SLC14A2Q15849 920 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 KCNMB1Q16558 191 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 TMEM67Q5HYA8 995 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 NSMFQ6X4W1 530 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 SCUBE1Q8IWY4 988 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 PPIL6Q8IXY8 311 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 INTS4Q96HW7 963 aaKnown RBP4.42□□□□□ -1.7
GYPB-207ENST00000506679 GPR160Q9UJ42 338 aa4.42□□□□□ -1.7
GYPB-207ENST00000506679 TRBV23-1A0A0A0MS06 115 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 PRKCAP17252 672 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 LTBRP36941 435 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 KCNJ6P48051 423 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 RBM10P98175 930 aaKnown RBP4.41□□□□□ -1.7
GYPB-207ENST00000506679 SQSTM1Q13501 440 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 FAM209AQ5JX71 171 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 STYK1Q6J9G0 422 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 RSPO2Q6UXX9 243 aaPredicted RBP4.41□□□□□ -1.7
GYPB-207ENST00000506679 NOP9Q86U38 636 aaKnown RBP4.41□□□□□ -1.7
GYPB-207ENST00000506679 CPNE8Q86YQ8 564 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 JAMLQ86YT9 394 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 IRF2BP1Q8IU81 584 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 DPF3Q92784 378 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 DIO2Q92813 273 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 SLC26A8Q96RN1 970 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 MTA3Q9BTC8 594 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 KANSL2Q9H9L4 492 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 PDLIM7Q9NR12 457 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 GPR27Q9NS67 375 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 TMEM260Q9NX78 707 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.41□□□□□ -1.7
GYPB-207ENST00000506679 FBLN5Q9UBX5 448 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 PTCH2Q9Y6C5 1203 aa4.41□□□□□ -1.7
GYPB-207ENST00000506679 CCDC163A0A0D9SF12 145 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 HRKO00198 91 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 SRGAP3O43295 1099 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 LCP1P13796 627 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 GALK1P51570 392 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 SUMO1P63165 101 aaKnown RBP4.4□□□□□ -1.71
GYPB-207ENST00000506679 TRIM61Q5EBN2 209 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 JAZF1Q86VZ6 243 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 NLRP10Q86W26 655 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 RCBTB1Q8NDN9 531 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 ZSWIM2Q8NEG5 633 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 NUP43Q8NFH3 380 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 SH3TC2Q8TF17 1288 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 DCAF4Q8WV16 495 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 RNPC3Q96LT9 517 aaKnown RBP4.4□□□□□ -1.71
GYPB-207ENST00000506679 DHRS4Q9BTZ2 278 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 SLC6A17Q9H1V8 727 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.4□□□□□ -1.71
GYPB-207ENST00000506679 FBXL7Q9UJT9 491 aa4.4□□□□□ -1.71
GYPB-207ENST00000506679 MRPS23Q9Y3D9 190 aaKnown RBP4.4□□□□□ -1.71
GYPB-207ENST00000506679 ASXL2Q76L83 1435 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 KCNQ2O43526 872 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 NPHS1O60500 1241 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 MSCO60682 206 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 GLI4P10075 376 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 CYP4F8P98187 520 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 MAMDC2Q7Z304 686 aaPredicted RBP4.39□□□□□ -1.71
GYPB-207ENST00000506679 PLEKHO2Q8TD55 490 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 LIN37Q96GY3 246 aaPredicted RBP4.39□□□□□ -1.71
GYPB-207ENST00000506679 CDC6Q99741 560 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 ZFYVE21Q9BQ24 234 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 GULP1Q9UBP9 304 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 TBX22Q9Y458 520 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 X6R8D5 127 aa4.39□□□□□ -1.71
GYPB-207ENST00000506679 BLACEA4D250 179 aa4.38□□□□□ -1.71
GYPB-207ENST00000506679 DBHP09172 617 aa4.38□□□□□ -1.71
GYPB-207ENST00000506679 ARL4AP40617 200 aa4.38□□□□□ -1.71
GYPB-207ENST00000506679 GTF2A2P52657 109 aa4.38□□□□□ -1.71
GYPB-207ENST00000506679 GPR85P60893 370 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms