RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
DSP-203ENST00000506617 SLC35G1Q2M3R5 365 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 QRICH1Q2TAL8 776 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 USH1GQ495M9 461 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 CCDC144CPQ8IYA2 1237 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
DSP-203ENST00000506617 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
DSP-203ENST00000506617 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.33
DSP-203ENST00000506617 PFASO15067 1338 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 POTEB2H3BUK9 544 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 NFIBO00712 420 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
DSP-203ENST00000506617 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.32
DSP-203ENST00000506617 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 RAB11FIP4Q86YS3 637 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.32
DSP-203ENST00000506617 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
DSP-203ENST00000506617 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.32
DSP-203ENST00000506617 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
DSP-203ENST00000506617 LARGE1O95461 756 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 CNGA1P29973 690 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 STK3Q13188 491 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 CUL4AQ13619 759 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 PRAMEF19Q5SWL8 479 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
DSP-203ENST00000506617 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
DSP-203ENST00000506617 MKI67P46013 3256 aaKnown RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
DSP-203ENST00000506617 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 SLC30A10Q6XR72 485 aa17.06■□□□□ 0.32
DSP-203ENST00000506617 ZNF467Q7Z7K2 595 aaPredicted RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
DSP-203ENST00000506617 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
DSP-203ENST00000506617 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 INTS4Q96HW7 963 aaKnown RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
DSP-203ENST00000506617 ASTN1O14525 1302 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 ABCB11O95342 1321 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 AKAP17AQ02040 695 aaKnown RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 LHX8Q68G74 356 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 MAMDC4Q6UXC1 1216 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 WASF1Q92558 559 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
DSP-203ENST00000506617 PIGSQ96S52 555 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 OGDHLQ9ULD0 1010 aa17.05■□□□□ 0.32
DSP-203ENST00000506617 ALPK3Q96L96 1907 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 DEXIO95424 95 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 CALML3P27482 149 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 RNF207Q6ZRF8 634 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 CMTR1Q8N1G2 835 aaKnown RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 MAP3K20Q9NYL2 800 aaKnown RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
DSP-203ENST00000506617 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
DSP-203ENST00000506617 SEPT4O43236 478 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 MSCO60682 206 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 ZNF865P0CJ78 1059 aaPredicted RBP17.03■□□□□ 0.32
DSP-203ENST00000506617 CAPN2P17655 700 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
DSP-203ENST00000506617 GHRHRQ02643 423 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 UBE2Q1Q7Z7E8 422 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 DIS3LQ8TF46 1054 aaKnown RBP17.03■□□□□ 0.32
DSP-203ENST00000506617 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
DSP-203ENST00000506617 SH3GLB2Q9NR46 395 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms