RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FLCNQ8NFG4 579 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 MMP19Q99542 508 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 ADAMTS10Q9H324 1103 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 PRDM7Q9NQW5 492 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 AQP7O14520 342 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 MSCO60682 206 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 PRNPP04156 253 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 KCNAB2Q13303 367 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 RALGPS1Q5JS13 557 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 MBLAC2Q68D91 279 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 MTDHQ86UE4 582 aaKnown RBP8.42□□□□□ -1.06
HERC4-213ENST00000506515 VSIG10LQ86VR7 867 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 DTX1Q86Y01 620 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 RCBTB1Q8NDN9 531 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 MAGEB10Q96LZ2 347 aaPredicted RBP8.42□□□□□ -1.06
HERC4-213ENST00000506515 GPR27Q9NS67 375 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 ANGEL1Q9UNK9 670 aaKnown RBP8.42□□□□□ -1.06
HERC4-213ENST00000506515 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
HERC4-213ENST00000506515 KCNQ2O43526 872 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 DNAJC8O75937 253 aaPredicted RBP8.41□□□□□ -1.06
HERC4-213ENST00000506515 RASGRP1O95267 797 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 CRTAMO95727 393 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 GUCY1A3Q02108 690 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 PTPROQ16827 1216 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 RSPO2Q6UXX9 243 aaPredicted RBP8.41□□□□□ -1.06
HERC4-213ENST00000506515 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 SCLYQ96I15 445 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 GPATCH3Q96I76 525 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 PUS7Q96PZ0 661 aaKnown RBP8.41□□□□□ -1.06
HERC4-213ENST00000506515 ALPK1Q96QP1 1244 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 MAGEC2Q9UBF1 373 aaPredicted RBP8.41□□□□□ -1.06
HERC4-213ENST00000506515 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 PCDHA8Q9Y5H6 950 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 PCDHA2Q9Y5H9 948 aa8.41□□□□□ -1.06
HERC4-213ENST00000506515 OPA1O60313 960 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 SPINK2P20155 84 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 GPR85P60893 370 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 DUSP4Q13115 394 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 TESK1Q15569 626 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 HLA-DQA1Q5Y7H0 255 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 JAMLQ86YT9 394 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 MAP6Q96JE9 813 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 ZFYVE21Q9BQ24 234 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
HERC4-213ENST00000506515 TNPO3Q9Y5L0 923 aaKnown RBP8.4□□□□□ -1.06
HERC4-213ENST00000506515 C7orf72A4D263 438 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 PDE8AO60658 829 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 USP2O75604 605 aaPredicted RBP8.39□□□□□ -1.07
HERC4-213ENST00000506515 APPP05067 770 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 ZGLP1P0C6A0 271 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 HK2P52789 917 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 TARS2Q9BW92 718 aaKnown RBP8.39□□□□□ -1.07
HERC4-213ENST00000506515 INTS7Q9NVH2 962 aaKnown RBP8.39□□□□□ -1.07
HERC4-213ENST00000506515 BTG4Q9NY30 223 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 TNFRSF10DQ9UBN6 386 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 TMEM59LQ9UK28 342 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 COL4A3BPQ9Y5P4 624 aa8.39□□□□□ -1.07
HERC4-213ENST00000506515 A0A087X0B3 334 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 FADS2P1A8MWK0 482 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 PPM1GO15355 546 aaPredicted RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 MYO1BO43795 1136 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 IBSPP21815 317 aaPredicted RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 CNGA1P29973 690 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 ZNF460Q14592 562 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 LBX2Q6XYB7 198 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 CEP128Q6ZU80 1094 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 THNSL2Q86YJ6 484 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.38□□□□□ -1.07
HERC4-213ENST00000506515 ZCRB1Q8TBF4 217 aaKnown RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 LINC01599Q8WXQ3 324 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 TMX1Q9H3N1 280 aa8.38□□□□□ -1.07
HERC4-213ENST00000506515 TIMM13Q9Y5L4 95 aaPredicted RBP8.38□□□□□ -1.07
HERC4-213ENST00000506515 TCRBV16S1A1N1A0A5B0 115 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 NPHS1O60500 1241 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 ASLP04424 464 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 IGFALSP35858 605 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 RTP1P59025 263 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 NFXL1Q6ZNB6 911 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 TP53INP2Q8IXH6 220 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 UBR7Q8N806 425 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 PI4K2BQ8TCG2 481 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 ALG1Q9BT22 464 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 PAK6Q9NQU5 681 aaPredicted RBP8.37□□□□□ -1.07
HERC4-213ENST00000506515 PCMTD2Q9NV79 361 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 GULP1Q9UBP9 304 aa8.37□□□□□ -1.07
HERC4-213ENST00000506515 SRGAP2CP0DJJ0 459 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 NAT1P18440 290 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 FUT4P22083 530 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 BCL6P41182 706 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 KIR2DL1P43626 348 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms