RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 SLC15A5A6NIM6 579 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 H3BQV1 296 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
TRIM23-205ENST00000506400 OPLAHO14841 1288 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 MMP1P03956 469 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 PSMC4P43686 418 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 HSD17B4P51659 736 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 NSMFQ6X4W1 530 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 BLIDQ8IZY5 108 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 DAGLBQ8NCG7 672 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
TRIM23-205ENST00000506400 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 KCNJ14Q9UNX9 436 aa12.85□□□□□ -0.35
TRIM23-205ENST00000506400 MEIS2O14770 477 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 GNRH1P01148 92 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 HOXD10P28358 340 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 KRT2P35908 639 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 FOSBP53539 338 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 RPS6P62753 249 aaKnown RBP12.84□□□□□ -0.35
TRIM23-205ENST00000506400 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-205ENST00000506400 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-205ENST00000506400 SOCS4Q8WXH5 440 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
TRIM23-205ENST00000506400 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
TRIM23-205ENST00000506400 COL11A1P12107 1806 aaPredicted RBP12.83□□□□□ -0.35
TRIM23-205ENST00000506400 DNAJC25-GNG10A0A024R161 153 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
TRIM23-205ENST00000506400 SYT1P21579 422 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
TRIM23-205ENST00000506400 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 GRB14Q14449 540 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 MORN1Q5T089 497 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 REXO1Q8N1G1 1221 aaKnown RBP12.83□□□□□ -0.36
TRIM23-205ENST00000506400 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
TRIM23-205ENST00000506400 TBC1D5Q92609 795 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
TRIM23-205ENST00000506400 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
TRIM23-205ENST00000506400 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 STX6O43752 255 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 ADORA2AP29274 412 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 CTCFP49711 727 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 PRMT2P55345 433 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 NPY5RQ15761 445 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 UBE2SQ16763 222 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
TRIM23-205ENST00000506400 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
TRIM23-205ENST00000506400 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 CCDC194A0A1B0GVG4 234 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 B4DLN1 442 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 M0R2N6 131 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 FOXN1O15353 648 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-205ENST00000506400 CTGFP29279 349 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 RGS2P41220 211 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 PWP2Q15269 919 aaKnown RBP12.81□□□□□ -0.36
TRIM23-205ENST00000506400 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
TRIM23-205ENST00000506400 USP6NLQ92738 828 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 TAAR1Q96RJ0 339 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 GJD2Q9UKL4 321 aa12.81□□□□□ -0.36
TRIM23-205ENST00000506400 COBLO75128 1261 aa12.8□□□□□ -0.36
TRIM23-205ENST00000506400 PGK2P07205 417 aa12.8□□□□□ -0.36
TRIM23-205ENST00000506400 HOXC6P09630 235 aa12.8□□□□□ -0.36
TRIM23-205ENST00000506400 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
TRIM23-205ENST00000506400 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM23-205ENST00000506400 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
TRIM23-205ENST00000506400 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
TRIM23-205ENST00000506400 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms