RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 A0A1W2PQ45 241 aaPredicted RBP16.28■□□□□ 0.2
SNHG4-203ENST00000506188 A0A1W2PQY0 241 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 PALM3A6NDB9 673 aaPredicted RBP16.28■□□□□ 0.2
SNHG4-203ENST00000506188 SLC27A2O14975 620 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
SNHG4-203ENST00000506188 DDAH1O94760 285 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 GRM4Q14833 912 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
SNHG4-203ENST00000506188 SEC63Q9UGP8 760 aaKnown RBP16.28■□□□□ 0.2
SNHG4-203ENST00000506188 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
SNHG4-203ENST00000506188 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 HMGB1P09429 215 aaKnown RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 MAGEA10P43363 369 aaPredicted RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 FGD1P98174 961 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 TRIM60Q495X7 471 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 SLC30A10Q6XR72 485 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 TLK2Q86UE8 772 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 FBXO16Q8IX29 292 aaPredicted RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 STAG2Q8N3U4 1231 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 MORC4Q8TE76 937 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 LENG1Q96BZ8 264 aaPredicted RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 IWS1Q96ST2 819 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
SNHG4-203ENST00000506188 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
SNHG4-203ENST00000506188 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
SNHG4-203ENST00000506188 REC8O95072 547 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 CFBP00751 764 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 ASGR1P07306 291 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 LIFRP42702 1097 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 CPT1AP50416 773 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 TLE2Q04725 743 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 TROAPQ12815 778 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 SNX17Q15036 470 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 NECTIN1Q15223 517 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 STXBP2Q15833 593 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 FSCN1Q16658 493 aaKnown RBP16.26■□□□□ 0.19
SNHG4-203ENST00000506188 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 STOX1Q6ZVD7 989 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 RRP36Q96EU6 259 aaKnown RBP16.26■□□□□ 0.19
SNHG4-203ENST00000506188 TOX2Q96NM4 488 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 RMDN3Q96TC7 470 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 GDF15Q99988 308 aa16.26■□□□□ 0.19
SNHG4-203ENST00000506188 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
SNHG4-203ENST00000506188 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
SNHG4-203ENST00000506188 SLC34A2O95436 690 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 CLTBP09497 229 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 SMPD1P17405 629 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 SMARCA1P28370 1054 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 MDM2Q00987 491 aaPredicted RBP16.25■□□□□ 0.19
SNHG4-203ENST00000506188 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 DUSP28Q4G0W2 176 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 ZNF654Q8IZM8 581 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 KATNBL1Q9H079 304 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 RIOX1Q9H6W3 641 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 TMEM39AQ9NV64 488 aa16.25■□□□□ 0.19
SNHG4-203ENST00000506188 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-203ENST00000506188 KPNA6O60684 536 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 RAG1P15918 1043 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 NKX3-2P78367 333 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 TAPT1Q6NXT6 567 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-203ENST00000506188 CUL5Q93034 780 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
SNHG4-203ENST00000506188 PIGSQ96S52 555 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 LY9Q9HBG7 655 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 PDGFCQ9NRA1 345 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
SNHG4-203ENST00000506188 GNEQ9Y223 722 aaKnown RBP16.24■□□□□ 0.19
SNHG4-203ENST00000506188 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-203ENST00000506188 BRCA2P51587 3418 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.23■□□□□ 0.19
SNHG4-203ENST00000506188 EIF3JO75822 258 aaKnown RBP16.23■□□□□ 0.19
SNHG4-203ENST00000506188 TXNP10599 105 aaKnown RBP16.23■□□□□ 0.19
SNHG4-203ENST00000506188 ANTXR2P58335 489 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 ANKRD33Q7Z3H0 272 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 OR6J1Q8NGC5 347 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 MTMR8Q96EF0 704 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
SNHG4-203ENST00000506188 RBM47A0AV96 593 aaKnown RBP16.22■□□□□ 0.19
SNHG4-203ENST00000506188 ARVCFO00192 962 aa16.22■□□□□ 0.19
SNHG4-203ENST00000506188 SH2B2O14492 632 aaPredicted RBP16.22■□□□□ 0.19
SNHG4-203ENST00000506188 EDNRBP24530 442 aa16.22■□□□□ 0.19
SNHG4-203ENST00000506188 FXR1P51114 621 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNHG4-203ENST00000506188 BEX3Q00994 111 aa16.22■□□□□ 0.19
SNHG4-203ENST00000506188 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms