RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 QRICH1Q2TAL8 776 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 ZNF697Q5TEC3 545 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 RUFY2Q8WXA3 655 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 TSEN34Q9BSV6 310 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-215ENST00000506161 MYH7BA7E2Y1 1941 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 ASB14A6NK59 587 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 OPLAHO14841 1288 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 NKX3-2P78367 333 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 ASPRV1Q53RT3 343 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 RNF207Q6ZRF8 634 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 MB21D2Q8IYB1 491 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 BADQ92934 168 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 UBAC1Q9BSL1 405 aa19.57■□□□□ 0.72
PDLIM7-215ENST00000506161 VCANP13611 3396 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 PQBP1O60828 265 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 EPHB4P54760 987 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 FAAP100Q0VG06 881 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 CCDC178Q5BJE1 867 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 TLK2Q86UE8 772 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 STARD7Q9NQZ5 370 aa19.56■□□□□ 0.72
PDLIM7-215ENST00000506161 GRIN2DO15399 1336 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 CYTH3O43739 400 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 EDNRBP24530 442 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 NT5C2P49902 561 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 CDK7P50613 346 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 GNASQ5JWF2 1037 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 MTMR8Q96EF0 704 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 LBHD1Q9BQE6 289 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 DOCK5Q9H7D0 1870 aa19.55■□□□□ 0.72
PDLIM7-215ENST00000506161 PALM3A6NDB9 673 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 MOXD2PA6NHM9 499 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 RBAK-RBAKDNI3L0D1 243 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 GRM4Q14833 912 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 CXCL17Q6UXB2 119 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 MAFAQ8NHW3 353 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 COPS5Q92905 334 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 TAAR1Q96RJ0 339 aa19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 CDX2Q99626 313 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-215ENST00000506161 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 SPTBN5Q9NRC6 3674 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 RBM47A0AV96 593 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 KLRF2D3W0D1 207 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 IFIT3O14879 490 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 DYNC1LI2O43237 492 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 ARIH2O95376 493 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 CLTBP09497 229 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 SHHQ15465 462 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 KIAA1211Q6ZU35 1233 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 CENPQQ7L2Z9 268 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 ANKRD33Q7Z3H0 272 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 NCOA7Q8NI08 942 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 PPP1R13LQ8WUF5 828 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 VTA1Q9NP79 307 aa19.53■□□□□ 0.72
PDLIM7-215ENST00000506161 SLC27A2O14975 620 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 KIAA0355O15063 1070 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 PSMC6P62333 389 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 TROAPQ12815 778 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 IQSEC1Q6DN90 963 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 SCN5AQ14524 2016 aa19.52■□□□□ 0.72
PDLIM7-215ENST00000506161 ABCB11O95342 1321 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 DUSP28Q4G0W2 176 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 SYMPKQ92797 1274 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 PIGSQ96S52 555 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 WDR11Q9BZH6 1224 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 ADD3Q9UEY8 706 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 ELP1O95163 1332 aa19.51■□□□□ 0.71
PDLIM7-215ENST00000506161 GBF1Q92538 1859 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 TRDNQ13061 729 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 WTAPQ15007 396 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 FAM126BQ8IXS8 530 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 SLC43A3Q8NBI5 491 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 NUP133Q8WUM0 1156 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 GLT1D1Q96MS3 346 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 RIOX1Q9H6W3 641 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 PRKAG2Q9UGJ0 569 aa19.5■□□□□ 0.71
PDLIM7-215ENST00000506161 ARVCFO00192 962 aa19.49■□□□□ 0.71
PDLIM7-215ENST00000506161 TMEM67Q5HYA8 995 aa19.49■□□□□ 0.71
PDLIM7-215ENST00000506161 CREB3L3Q68CJ9 461 aa19.49■□□□□ 0.71
PDLIM7-215ENST00000506161 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms