RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 NYAP2Q9P242 653 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
PDCD6-203ENST00000505526 TLR3O15455 904 aaKnown RBP18.34■□□□□ 0.53
PDCD6-203ENST00000505526 PRC1O43663 620 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 NT5C2P49902 561 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 NEK4P51957 841 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 ANTXR2P58335 489 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 ANKRD35Q8N283 1001 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
PDCD6-203ENST00000505526 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
PDCD6-203ENST00000505526 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.53
PDCD6-203ENST00000505526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.533e-7■■■□□ 15.3
PDCD6-203ENST00000505526 KIFC2Q96AC6 838 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 FGD4Q96M96 766 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 ZKSCAN3Q9BRR0 538 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 MSRAQ9UJ68 235 aa18.33■□□□□ 0.53
PDCD6-203ENST00000505526 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.53
PDCD6-203ENST00000505526 MUC3AQ02505 3323 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 CYP2C18P33260 490 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 ADGRE1Q14246 886 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 RAB30Q15771 203 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 CCDC85BQ15834 202 aaPredicted RBP18.33■□□□□ 0.52
PDCD6-203ENST00000505526 ARMCX2Q7L311 632 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 IQCA1Q86XH1 822 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 IL23AQ9NPF7 189 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 CLIP2Q9UDT6 1046 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 FBXO40Q9UH90 709 aa18.33■□□□□ 0.52
PDCD6-203ENST00000505526 CTAGE5O15320 804 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 NMT2O60551 498 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 CD4P01730 458 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 IGFBP4P22692 258 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 MRPS5P82675 430 aaKnown RBP18.32■□□□□ 0.52
PDCD6-203ENST00000505526 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 HERVK_113Q902F9 699 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 WDR19Q8NEZ3 1342 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 PLIN4Q96Q06 1357 aa18.32■□□□□ 0.52
PDCD6-203ENST00000505526 IFIT3O14879 490 aaKnown RBP18.31■□□□□ 0.52
PDCD6-203ENST00000505526 FGD1P98174 961 aa18.31■□□□□ 0.52
PDCD6-203ENST00000505526 BEX3Q00994 111 aa18.31■□□□□ 0.52
PDCD6-203ENST00000505526 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
PDCD6-203ENST00000505526 ZSCAN10Q96SZ4 725 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-203ENST00000505526 KATNBL1Q9H079 304 aa18.31■□□□□ 0.52
PDCD6-203ENST00000505526 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
PDCD6-203ENST00000505526 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
PDCD6-203ENST00000505526 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-203ENST00000505526 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 FGBP02675 491 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 NKX3-2P78367 333 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
PDCD6-203ENST00000505526 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 Q6ZUG5 572 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 TTC14Q96N46 770 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 NKX2-4Q9H2Z4 354 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 SLC28A3Q9HAS3 691 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 GPHNQ9NQX3 736 aaPredicted RBP18.3■□□□□ 0.52
PDCD6-203ENST00000505526 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 RAPGEFL1Q9UHV5 662 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 TNKSO95271 1327 aa18.3■□□□□ 0.52
PDCD6-203ENST00000505526 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 ERICH2A1L162 156 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 OAZ1P54368 228 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 CNTN2Q02246 1040 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 CXCL17Q6UXB2 119 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
PDCD6-203ENST00000505526 ENAHQ8N8S7 591 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-203ENST00000505526 IGDCC4Q8TDY8 1250 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 CEP95Q96GE4 821 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 UHRF1Q96T88 793 aaPredicted RBP18.29■□□□□ 0.52
PDCD6-203ENST00000505526 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 HOMER2Q9NSB8 354 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 MCM3APO60318 1980 aa18.29■□□□□ 0.52
PDCD6-203ENST00000505526 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
PDCD6-203ENST00000505526 SH2B2O14492 632 aaPredicted RBP18.28■□□□□ 0.52
PDCD6-203ENST00000505526 ST18O60284 1047 aa18.28■□□□□ 0.52
PDCD6-203ENST00000505526 SLC43A3Q8NBI5 491 aa18.28■□□□□ 0.52
PDCD6-203ENST00000505526 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
PDCD6-203ENST00000505526 MKL1Q969V6 931 aa18.28■□□□□ 0.52
PDCD6-203ENST00000505526 MTA3Q9BTC8 594 aa18.28■□□□□ 0.52
PDCD6-203ENST00000505526 YBX2Q9Y2T7 364 aaKnown RBP18.28■□□□□ 0.52
PDCD6-203ENST00000505526 ASTN1O14525 1302 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 UMODL1Q5DID0 1318 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 CABYRO75952 493 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 AK2P54819 239 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 TOB2Q14106 344 aaPredicted RBP18.27■□□□□ 0.52
PDCD6-203ENST00000505526 WTAPQ15007 396 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 SEC23AQ15436 765 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 OTOP2Q7RTS6 562 aa18.27■□□□□ 0.52
PDCD6-203ENST00000505526 BRF1Q92994 677 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms