RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
LIN54-204ENST00000505397 KIF4BQ2VIQ3 1234 aa19■□□□□ 0.63
LIN54-204ENST00000505397 GPKOWQ92917 476 aaPredicted RBP eCLIP19■□□□□ 0.63
LIN54-204ENST00000505397 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
LIN54-204ENST00000505397 CCSER1Q9C0I3 900 aa19■□□□□ 0.63
LIN54-204ENST00000505397 PCDHA6Q9UN73 950 aa19■□□□□ 0.63
LIN54-204ENST00000505397 MTMR7Q9Y216 660 aa19■□□□□ 0.63
LIN54-204ENST00000505397 PCDHA8Q9Y5H6 950 aa19■□□□□ 0.63
LIN54-204ENST00000505397 OAS2P29728 719 aaKnown RBP19■□□□□ 0.63
LIN54-204ENST00000505397 GALNT17Q6IS24 598 aa19■□□□□ 0.63
LIN54-204ENST00000505397 RTKN2Q8IZC4 609 aa19■□□□□ 0.63
LIN54-204ENST00000505397 NAPGQ99747 312 aaPredicted RBP19■□□□□ 0.63
LIN54-204ENST00000505397 MRIQ9BWK5 157 aa19■□□□□ 0.63
LIN54-204ENST00000505397 KBTBD4Q9NVX7 518 aa19■□□□□ 0.63
LIN54-204ENST00000505397 PUF60Q9UHX1 559 aaKnown RBP19■□□□□ 0.63
LIN54-204ENST00000505397 SERPINB13Q9UIV8 391 aa19■□□□□ 0.63
LIN54-204ENST00000505397 AMPD2Q01433 879 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 UBXN1Q04323 297 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 WHAMMP3Q1A5X7 153 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 DTHD1Q6ZMT9 781 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 MSL3Q8N5Y2 521 aaKnown RBP18.99■□□□□ 0.63
LIN54-204ENST00000505397 MB21D1Q8N884 522 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 DNAJC7Q99615 494 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 THAP9Q9H5L6 903 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 REXO2Q9Y3B8 237 aaKnown RBP18.99■□□□□ 0.63
LIN54-204ENST00000505397 RHOBTB3O94955 611 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 EEF1GP26641 437 aaKnown RBP18.99■□□□□ 0.63
LIN54-204ENST00000505397 BEND6Q5SZJ8 279 aaPredicted RBP18.99■□□□□ 0.63
LIN54-204ENST00000505397 RASGRP4Q8TDF6 673 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 TMEM60Q9H2L4 133 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 SWAP70Q9UH65 585 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 MAPK8IP1Q9UQF2 711 aa18.99■□□□□ 0.63
LIN54-204ENST00000505397 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 PMS1P54277 932 aaKnown RBP18.98■□□□□ 0.63
LIN54-204ENST00000505397 GIMAP8Q8ND71 665 aaPredicted RBP18.98■□□□□ 0.63
LIN54-204ENST00000505397 PNKPQ96T60 521 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 EPN1Q9Y6I3 576 aaPredicted RBP18.98■□□□□ 0.63
LIN54-204ENST00000505397 TRIM49BA6NDI0 452 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 LAD1O00515 517 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 PRPHP41219 470 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 CEP95Q96GE4 821 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 CHP1Q99653 195 aa18.98■□□□□ 0.63
LIN54-204ENST00000505397 CCDC194A0A1B0GVG4 234 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 TTC26A0AVF1 554 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 POLR3GO15318 223 aaPredicted RBP18.97■□□□□ 0.63
LIN54-204ENST00000505397 CYTH3O43739 400 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 NDUFA10O95299 355 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 DPEP1P16444 411 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 GABPAQ06546 454 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 SLF1Q9BQI6 1058 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 BARHL2Q9NY43 387 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 SERPINA10Q9UK55 444 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 PLIN4Q96Q06 1357 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 PSME4Q14997 1843 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 KIF13BQ9NQT8 1826 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 OR8K1Q8NGG5 319 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 ZCCHC17Q9NP64 241 aaKnown RBP18.97■□□□□ 0.63
LIN54-204ENST00000505397 CAPN11Q9UMQ6 739 aa18.97■□□□□ 0.63
LIN54-204ENST00000505397 PP2D1A8MPX8 630 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 STXBP3O00186 592 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 LRRC15Q8TF66 581 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 MYO3BQ8WXR4 1341 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 PALM3A6NDB9 673 aaPredicted RBP18.96■□□□□ 0.63
LIN54-204ENST00000505397 NFIAQ12857 509 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 TTI2Q6NXR4 508 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 ZNF662Q6ZS27 426 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 PSMD1Q99460 953 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 LZTS2Q9BRK4 669 aa18.96■□□□□ 0.63
LIN54-204ENST00000505397 ERICH4A6NGS2 130 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 WDR59Q6PJI9 974 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 CCDC125Q86Z20 511 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 L1RE1Q9UN81 338 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 TFRCP02786 760 aaKnown RBP18.95■□□□□ 0.62
LIN54-204ENST00000505397 INF2Q27J81 1249 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 NOC3LQ8WTT2 800 aaKnown RBP18.95■□□□□ 0.62
LIN54-204ENST00000505397 CUEDC2Q9H467 287 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
LIN54-204ENST00000505397 PSMD14O00487 310 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 UBA7P41226 1012 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 MEA1Q16626 185 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 DHTKD1Q96HY7 919 aaPredicted RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 TTYH3Q9C0H2 523 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 DHX36Q9H2U1 1008 aaKnown RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 LUC7L2Q9Y383 392 aaKnown RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 CTAGE15A4D2H0 777 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 CTAGE8P0CG41 777 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 CACNB3P54284 484 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 SOGA3Q5TF21 947 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 CTAGE6Q86UF2 777 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 ZSCAN29Q8IWY8 852 aaPredicted RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 CTAGE4Q8IX94 777 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 HAUS4Q9H6D7 363 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 YDJCA8MPS7 323 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 H3BQF6 201 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 PSMA7O14818 248 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms