RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 LRIG2O94898 1065 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 TMPOP42166 694 aaKnown RBP9.7□□□□□ -0.86
UBE2B-204ENST00000504431 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
UBE2B-204ENST00000504431 ITPK1Q13572 414 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 SF3A1Q15459 793 aaKnown RBP9.7□□□□□ -0.86
UBE2B-204ENST00000504431 NFE2L2Q16236 605 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 SLC51AQ86UW1 340 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 MCATQ8IVS2 390 aaKnown RBP9.7□□□□□ -0.86
UBE2B-204ENST00000504431 MFSD2AQ8NA29 543 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 RTF1Q92541 710 aaKnown RBP9.7□□□□□ -0.86
UBE2B-204ENST00000504431 RUNDC1Q96C34 613 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 CRBNQ96SW2 442 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 GMLQ99445 158 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 FOXQ1Q9C009 403 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 GMIPQ9P107 970 aa9.7□□□□□ -0.86
UBE2B-204ENST00000504431 DNAJA1P31689 397 aaKnown RBP9.69□□□□□ -0.86
UBE2B-204ENST00000504431 CLCQ05315 142 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 TEFQ10587 303 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 AMIGO3Q86WK7 504 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 FAM13CQ8NE31 585 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 OR6P1Q8NGX9 317 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBE2B-204ENST00000504431 TJP2Q9UDY2 1190 aa9.69□□□□□ -0.86
UBE2B-204ENST00000504431 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 SSBP05455 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 FBXW10Q5XX13 1052 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 SMARCC1Q92922 1105 aaPredicted RBP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 ACSF2Q96CM8 615 aaPredicted RBP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 SRRTQ9BXP5 876 aaKnown RBP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 FBRSQ9HAH7 460 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 STK32BQ9NY57 414 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 PRKAG2Q9UGJ0 569 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 RGPD3A6NKT7 1758 aaPredicted RBP9.68□□□□□ -0.86
UBE2B-204ENST00000504431 RGPD4Q7Z3J3 1758 aa9.68□□□□□ -0.86
UBE2B-204ENST00000504431 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 PLEKHG2Q9H7P9 1386 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 PRAMEF22A3QJZ6 481 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
UBE2B-204ENST00000504431 CYP27A1Q02318 531 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 SLBPQ14493 270 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBE2B-204ENST00000504431 RNF43Q68DV7 783 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 SEZ6L2Q6UXD5 910 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 DNAJC10Q8IXB1 793 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 DBNDD2Q9BQY9 259 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 KLHL3Q9UH77 587 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
UBE2B-204ENST00000504431 TAF1LQ8IZX4 1826 aa9.67□□□□□ -0.86
UBE2B-204ENST00000504431 SIPA1L3O60292 1781 aaPredicted RBP9.67□□□□□ -0.86
UBE2B-204ENST00000504431 CEMIPQ8WUJ3 1361 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 HMX2A2RU54 273 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 EIF6P56537 245 aaKnown RBP9.66□□□□□ -0.86
UBE2B-204ENST00000504431 NKAPLQ5M9Q1 402 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 PRAMEF13Q5VWM6 474 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 SLFN12Q8IYM2 578 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
UBE2B-204ENST00000504431 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 ZNF496Q96IT1 587 aaPredicted RBP9.66□□□□□ -0.86
UBE2B-204ENST00000504431 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 PPT2Q9UMR5 302 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 C5P01031 1676 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 PAPPAQ13219 1627 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
UBE2B-204ENST00000504431 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.86
UBE2B-204ENST00000504431 NFIAQ12857 509 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 TAF7Q15545 349 aaPredicted RBP9.65□□□□□ -0.86
UBE2B-204ENST00000504431 NKG7Q16617 165 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 CPSF6Q16630 551 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBE2B-204ENST00000504431 RSPO4Q2I0M5 234 aaPredicted RBP9.65□□□□□ -0.86
UBE2B-204ENST00000504431 ZNF746Q6NUN9 644 aaPredicted RBP9.65□□□□□ -0.86
UBE2B-204ENST00000504431 ZNF790Q6PG37 636 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 ZAR1Q86SH2 424 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 C1GALT1Q9NS00 363 aa9.65□□□□□ -0.86
UBE2B-204ENST00000504431 MRC1P22897 1456 aa9.65□□□□□ -0.87
UBE2B-204ENST00000504431 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
UBE2B-204ENST00000504431 PNPLA7Q6ZV29 1317 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 HTATSF1O43719 755 aaKnown RBP9.64□□□□□ -0.87
UBE2B-204ENST00000504431 DYRK3O43781 588 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 FGRP09769 529 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 FSTP19883 344 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 OVOS1Q6IE37 1185 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 UBE3DQ7Z6J8 389 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 COL23A1Q86Y22 540 aaPredicted RBP9.64□□□□□ -0.87
UBE2B-204ENST00000504431 CYB5D2Q8WUJ1 264 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
UBE2B-204ENST00000504431 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
UBE2B-204ENST00000504431 TANGO6Q9C0B7 1094 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 KCPQ6ZWJ8 1503 aa9.64□□□□□ -0.87
UBE2B-204ENST00000504431 C4BP0C0L5 1744 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms