RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PALM3A6NDB9 673 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 PPP1R11O60927 126 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 BEX3Q00994 111 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 GHRHRQ02643 423 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 TNFAIP2Q03169 654 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 EEPD1Q7L9B9 569 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 COL20A1Q9P218 1284 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 Q9Y3F1 56 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 GRIN2DO15399 1336 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 CLTBP09497 229 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 PARP1P09874 1014 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 TROAPQ12815 778 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 GPR153Q6NV75 609 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 RNF207Q6ZRF8 634 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 TLK2Q86UE8 772 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 BADQ92934 168 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 MAF1Q9H063 256 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 TBX21Q9UL17 535 aa16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 RBM8AQ9Y5S9 174 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-211ENST00000504318 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 CYTH3O43739 400 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 EPHB4P54760 987 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 GRM4Q14833 912 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 USH1GQ495M9 461 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 C9orf50Q5SZB4 431 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 FAM126BQ8IXS8 530 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 PCSK9Q8NBP7 692 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 DNERQ8NFT8 737 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-211ENST00000504318 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 CD4P01730 458 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 CALML3P27482 149 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 GNASQ5JWF2 1037 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 SYTL5Q8TDW5 730 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 RIOX1Q9H6W3 641 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 PRDM5Q9NQX1 630 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 ABCB11O95342 1321 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 CDH23Q9H251 3354 aa16.34■□□□□ 0.21
PDLIM7-211ENST00000504318 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 ARVCFO00192 962 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 ARIH2O95376 493 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 NCOA7Q8NI08 942 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 GLT1D1Q96MS3 346 aa16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-211ENST00000504318 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 DYNC1LI2O43237 492 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 HSD17B4P51659 736 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 SHHQ15465 462 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 TAAR1Q96RJ0 339 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 LBHD1Q9BQE6 289 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 WDR11Q9BZH6 1224 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 SPC25Q9HBM1 224 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 PRKAG2Q9UGJ0 569 aa16.32■□□□□ 0.2
PDLIM7-211ENST00000504318 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 ZBTB5O15062 677 aa16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 TRDNQ13061 729 aa16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
PDLIM7-211ENST00000504318 MROH7Q68CQ1 1323 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 SLC27A2O14975 620 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 WTAPQ15007 396 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 Q7L0L9 218 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 COPS5Q92905 334 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 MRPL11Q9Y3B7 192 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-211ENST00000504318 DCDC2CA8MYV0 355 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 CABYRO75952 493 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 RGS20O76081 388 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 TIMP1P01033 207 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 PSMC6P62333 389 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 PURAQ00577 322 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 PIGSQ96S52 555 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 MAP3K14Q99558 947 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms