RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PDLIM7Q9NR12 457 aa15.95■□□□□ 0.14
HOXC6-203ENST00000504315 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
HOXC6-203ENST00000504315 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
HOXC6-203ENST00000504315 ELP1O95163 1332 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 RBM47A0AV96 593 aaKnown RBP15.94■□□□□ 0.14
HOXC6-203ENST00000504315 ERICH2A1L162 156 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 KLRF2D3W0D1 207 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 C6orf222P0C671 652 aaPredicted RBP15.94■□□□□ 0.14
HOXC6-203ENST00000504315 SMPD1P17405 629 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 IRX5P78411 483 aaPredicted RBP15.94■□□□□ 0.14
HOXC6-203ENST00000504315 GHRHRQ02643 423 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 WTAPQ15007 396 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 ANKRD33Q7Z3H0 272 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 TOX2Q96NM4 488 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 RIOX1Q9H6W3 641 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 STARD7Q9NQZ5 370 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 PDGFCQ9NRA1 345 aa15.94■□□□□ 0.14
HOXC6-203ENST00000504315 ASGR1P07306 291 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 CALML3P27482 149 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 SLC35G1Q2M3R5 365 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 EEPD1Q7L9B9 569 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 CHST3Q7LGC8 479 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 FBXO11Q86XK2 927 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 TDHQ8IZJ6 230 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 PCDH10Q9P2E7 1040 aa15.93■□□□□ 0.14
HOXC6-203ENST00000504315 MRPL11Q9Y3B7 192 aaKnown RBP15.93■□□□□ 0.14
HOXC6-203ENST00000504315 OPLAHO14841 1288 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 SLC27A2O14975 620 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 ZBTB5O15062 677 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 CDK7P50613 346 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
HOXC6-203ENST00000504315 TLE2Q04725 743 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 DUSP28Q4G0W2 176 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 TMEM67Q5HYA8 995 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 GNASQ5JWF2 1037 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 CREB3L3Q68CJ9 461 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 MCF2L2Q86YR7 1114 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 SAMD3Q8N6K7 520 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 GLT1D1Q96MS3 346 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
HOXC6-203ENST00000504315 AMNQ9BXJ7 453 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 LY9Q9HBG7 655 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 PRKAG2Q9UGJ0 569 aa15.92■□□□□ 0.14
HOXC6-203ENST00000504315 TRIP12Q14669 1992 aaPredicted RBP15.92■□□□□ 0.14
HOXC6-203ENST00000504315 TRIM43BA6NCK2 446 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 B4DLN1 442 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 KIAA0355O15063 1070 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 CYTH3O43739 400 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 CLTBP09497 229 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 MRPL12P52815 198 aaKnown RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 COL9A3Q14050 684 aaPredicted RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 FSCN1Q16658 493 aaKnown RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 LRIT3Q3SXY7 679 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 SYTL5Q8TDW5 730 aaPredicted RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 TBC1D5Q92609 795 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 TRIM43Q96BQ3 446 aaPredicted RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 UBE2OQ9C0C9 1292 aaKnown RBP15.91■□□□□ 0.14
HOXC6-203ENST00000504315 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 COL20A1Q9P218 1284 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 MROH7Q68CQ1 1323 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
HOXC6-203ENST00000504315 CDC45O75419 566 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 DDAH1O94760 285 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 PTGS1P23219 599 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 MCM5P33992 734 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 HSD17B4P51659 736 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 BEX3Q00994 111 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 TMEM63BQ5T3F8 832 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 SLC43A3Q8NBI5 491 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
HOXC6-203ENST00000504315 LBHD1Q9BQE6 289 aaPredicted RBP15.9■□□□□ 0.14
HOXC6-203ENST00000504315 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
HOXC6-203ENST00000504315 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 NKRFO15226 690 aaKnown RBP eCLIP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 DYNC1LI2O43237 492 aaPredicted RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 PRC1O43663 620 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 CABYRO75952 493 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 ITGB8P26012 769 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 LIFRP42702 1097 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 PDE4DQ08499 809 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 CASC1Q6TDU7 716 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 ZNF654Q8IZM8 581 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 TMTC2Q8N394 836 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 NSUN6Q8TEA1 469 aaKnown RBP15.89■□□□□ 0.13
HOXC6-203ENST00000504315 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
HOXC6-203ENST00000504315 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms