RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PDLIM7Q9NR12 457 aa21■□□□□ 0.95
SH3TC1-208ENST00000504223 ADD3Q9UEY8 706 aaKnown RBP21■□□□□ 0.95
SH3TC1-208ENST00000504223 GNEQ9Y223 722 aaKnown RBP21■□□□□ 0.95
SH3TC1-208ENST00000504223 LOC102724159A0A0B4J2E5 919 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 PPP1R11O60927 126 aaPredicted RBP20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 C6orf222P0C671 652 aaPredicted RBP20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 CALML3P27482 149 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 TNFAIP2Q03169 654 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 TLE2Q04725 743 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 PWP2Q15269 919 aaKnown RBP20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 TDHQ8IZJ6 230 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 VTA1Q9NP79 307 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 PDGFCQ9NRA1 345 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 LTBP2Q14767 1821 aa20.99■□□□□ 0.95
SH3TC1-208ENST00000504223 PRC1O43663 620 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 CYTH3O43739 400 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 NEFLP07196 543 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 SMPD1P17405 629 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 EEPD1Q7L9B9 569 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 RASEFQ8IZ41 740 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 PCSK9Q8NBP7 692 aaKnown RBP20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 RGS22Q8NE09 1264 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 NUP133Q8WUM0 1156 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 MYL10Q9BUA6 226 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 STARD7Q9NQZ5 370 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 COL20A1Q9P218 1284 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 PRKAG2Q9UGJ0 569 aa20.98■□□□□ 0.95
SH3TC1-208ENST00000504223 ERICH2A1L162 156 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 TRIM43BA6NCK2 446 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 SH2B2O14492 632 aaPredicted RBP20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 OPLAHO14841 1288 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 DHX16O60231 1041 aaKnown RBP20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 ASGR1P07306 291 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 IQSEC1Q6DN90 963 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 ANKRD33Q7Z3H0 272 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 SH3RF1Q7Z6J0 888 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 TRIM43Q96BQ3 446 aaPredicted RBP20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 PRDM5Q9NQX1 630 aaPredicted RBP20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 ELP1O95163 1332 aa20.97■□□□□ 0.95
SH3TC1-208ENST00000504223 EDNRBP24530 442 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 SART3Q15020 963 aaKnown RBP20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 LRIT3Q3SXY7 679 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 GNASQ5JWF2 1037 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 TLK2Q86UE8 772 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 FBXO11Q86XK2 927 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 TOX2Q96NM4 488 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 LBHD1Q9BQE6 289 aaPredicted RBP20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 LRRC2Q9BYS8 371 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 MAF1Q9H063 256 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 RIOX1Q9H6W3 641 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 ABCB11O95342 1321 aa20.96■□□□□ 0.95
SH3TC1-208ENST00000504223 LAMA2P24043 3122 aaKnown RBP20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 CLTBP09497 229 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 BEX3Q00994 111 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 ZNF654Q8IZM8 581 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 DNERQ8NFT8 737 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 SYTL5Q8TDW5 730 aaPredicted RBP20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 GLT1D1Q96MS3 346 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 PIGSQ96S52 555 aa20.95■□□□□ 0.94
SH3TC1-208ENST00000504223 RBM47A0AV96 593 aaKnown RBP20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 ZBTB5O15062 677 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 ITGB8P26012 769 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 MCM5P33992 734 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 CDK7P50613 346 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 FAAP100Q0VG06 881 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 ADCK5Q3MIX3 580 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 NOL8Q76FK4 1167 aaKnown RBP20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 MTA3Q9BTC8 594 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 Q9Y3F1 56 aa20.94■□□□□ 0.94
SH3TC1-208ENST00000504223 KIAA0355O15063 1070 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 RXRAP19793 462 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 FSCN1Q16658 493 aaKnown RBP20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 DUSP28Q4G0W2 176 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 CATIPQ7Z7H3 387 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 HOMER1Q86YM7 354 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 RAB11FIP4Q86YS3 637 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 BADQ92934 168 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 TCEANC2Q96MN5 208 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 TAAR1Q96RJ0 339 aa20.93■□□□□ 0.94
SH3TC1-208ENST00000504223 DYNC1LI2O43237 492 aaPredicted RBP20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 DDAH1O94760 285 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 TMEM87BQ96K49 555 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 AMNQ9BXJ7 453 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 WDR11Q9BZH6 1224 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 AP5M1Q9H0R1 490 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 MRPL11Q9Y3B7 192 aaKnown RBP20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 KIAA1217Q5T5P2 1943 aa20.92■□□□□ 0.94
SH3TC1-208ENST00000504223 A0A0U1RQG5 324 aaPredicted RBP20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 PLEKHA8P1O95397 391 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 EXOSC10Q01780 885 aaKnown RBP20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 GHRHRQ02643 423 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 PDE4DQ08499 809 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 TSGA10IPQ3SY00 556 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 CXCL17Q6UXB2 119 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms