RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 HAUS1Q96CS2 278 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 KIAA1024Q9UPX6 916 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 MYL1P05976 194 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 PPM1KQ8N3J5 372 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 PLEKHA4Q9H4M7 779 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 RCOR1Q9UKL0 485 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 ABCC12Q96J65 1359 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 GCFC2P16383 781 aaKnown RBP18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 CASP14P31944 242 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 POLA2Q14181 598 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 GAS2L3Q86XJ1 694 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 CTAGE3PQ8IX95 158 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 HGSO14964 777 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 POLR2BP30876 1174 aaKnown RBP18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 APBA1Q02410 837 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 ANKRD42Q8N9B4 389 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 BBOF1Q8ND07 529 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 THRAP3Q9Y2W1 955 aaKnown RBP18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 ATF7P17544 494 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 GABPAQ06546 454 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 NRBP2Q9NSY0 501 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 CCPG1Q9ULG6 757 aa18.1■□□□□ 0.49
PCDHA1-203ENST00000504120 TTLL1O95922 423 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 LINC00301Q8NCQ3 95 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 BAG6P46379 1132 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 GNGT1P63211 74 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 ODR4Q5SWX8 454 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 PAGR1Q9BTK6 254 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 LMTK2Q8IWU2 1503 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 MMP1P03956 469 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 GAP43P17677 238 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 CDC23Q9UJX2 597 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 TACC3Q9Y6A5 838 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 LMNB1P20700 586 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 BPIFB4P59827 614 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 RABGGTAQ92696 567 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 RUNDC3BQ96NL0 473 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 VCXQ9H320 206 aa18.09■□□□□ 0.49
PCDHA1-203ENST00000504120 SH2B2O14492 632 aaPredicted RBP18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 SLFN14P0C7P3 912 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 DLATP10515 647 aaKnown RBP18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 CYP4A11Q02928 519 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 ANKRD35Q8N283 1001 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 P2RX5Q93086 422 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 GJA10Q969M2 543 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 ANTXR1Q9H6X2 564 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 IFNAR1P17181 557 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 TRIM50Q86XT4 487 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 MGARPQ8TDB4 240 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 CCDC127Q96BQ5 260 aa18.08■□□□□ 0.49
PCDHA1-203ENST00000504120 SPC25Q9HBM1 224 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 HESX1Q9UBX0 185 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 TMEM191BP0C7N4 346 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 NSFP46459 744 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 POLGP54098 1239 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 ZSCAN26Q16670 478 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 DPCR1Q3MIW9 517 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 ZNF658Q5TYW1 1059 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 PDZD4Q76G19 769 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 RPUSD2Q8IZ73 545 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 CHAMP1Q96JM3 812 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 DPH5Q9H2P9 285 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 GLI2P10070 1586 aa18.08■□□□□ 0.48
PCDHA1-203ENST00000504120 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 ZWINTO95229 277 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 MFAP3P55082 362 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 MYL7Q01449 175 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 STK17AQ9UEE5 414 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 BCAP29Q9UHQ4 241 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 PYCARDQ9ULZ3 195 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 TTLL3Q9Y4R7 772 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM160B1Q5W0V3 765 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 CCDC13Q8IYE1 715 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 RILPQ96NA2 401 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 WDR17Q8IZU2 1322 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 PHLDB2Q86SQ0 1253 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 ADGRB3O60242 1522 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 KIF11P52732 1056 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 BSPRYQ5W0U4 402 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 MAN1A1P33908 653 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 PTK2Q05397 1052 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 MAP7Q14244 749 aa18.07■□□□□ 0.48
PCDHA1-203ENST00000504120 PASKQ96RG2 1323 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms