RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CHMLP26374 656 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 CALML3P27482 149 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 GRIN2CQ14957 1233 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 PWP2Q15269 919 aaKnown RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 KATNBL1Q9H079 304 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 UPF3AQ9H1J1 476 aaKnown RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 VAT1LQ9HCJ6 419 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 Q9Y3F1 56 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 MROH7Q68CQ1 1323 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 NFIBO00712 420 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 ADCY6O43306 1168 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 CABYRO75952 493 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 TIMP1P01033 207 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 SMPD1P17405 629 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 CDK7P50613 346 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 NKX3-2P78367 333 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 TAPT1Q6NXT6 567 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 CLEC4DQ8WXI8 215 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 MAF1Q9H063 256 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 VTA1Q9NP79 307 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 PDGFCQ9NRA1 345 aa13.97□□□□□ -0.17
MED28-203ENST00000503945 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
MED28-203ENST00000503945 TNKSO95271 1327 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 TMEM265A0A087WTH1 108 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 A0A0U1RQG5 324 aaPredicted RBP13.96□□□□□ -0.17
MED28-203ENST00000503945 ARVCFO00192 962 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 ALDH5A1P51649 535 aaPredicted RBP13.96□□□□□ -0.17
MED28-203ENST00000503945 RPS6P62753 249 aaKnown RBP13.96□□□□□ -0.17
MED28-203ENST00000503945 BEX3Q00994 111 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 PDE4DQ08499 809 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
MED28-203ENST00000503945 USH1GQ495M9 461 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 MCF2L2Q86YR7 1114 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 DNERQ8NFT8 737 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.96□□□□□ -0.179e-12■■□□□ 14.1
MED28-203ENST00000503945 WDR11Q9BZH6 1224 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 TBX21Q9UL17 535 aa13.96□□□□□ -0.17
MED28-203ENST00000503945 RAD50Q92878 1312 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 ERICH2A1L162 156 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 TLR3O15455 904 aaKnown RBP13.95□□□□□ -0.18
MED28-203ENST00000503945 DNAJB2P25686 324 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 DUSP28Q4G0W2 176 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 MFSD5Q6N075 450 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 FBXO16Q8IX29 292 aaPredicted RBP13.95□□□□□ -0.18
MED28-203ENST00000503945 SEZ6LQ9BYH1 1024 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 IL25Q9H293 177 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 CPVLQ9H3G5 476 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
MED28-203ENST00000503945 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
MED28-203ENST00000503945 CDH23Q9H251 3354 aa13.95□□□□□ -0.18
MED28-203ENST00000503945 ASTN1O14525 1302 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 CTAGE5O15320 804 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 VCANP13611 3396 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 PTH1RQ03431 593 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
MED28-203ENST00000503945 CDC37Q16543 378 aaPredicted RBP13.94□□□□□ -0.18
MED28-203ENST00000503945 BRDTQ58F21 947 aaPredicted RBP13.94□□□□□ -0.18
MED28-203ENST00000503945 CXCL17Q6UXB2 119 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 FBXO11Q86XK2 927 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 NCOA7Q8NI08 942 aa13.94□□□□□ -0.18
MED28-203ENST00000503945 GPHNQ9NQX3 736 aaPredicted RBP13.94□□□□□ -0.18
MED28-203ENST00000503945 ABCB11O95342 1321 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 GRXCR1A8MXD5 290 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 IFIT3O14879 490 aaKnown RBP13.93□□□□□ -0.18
MED28-203ENST00000503945 SGSM2O43147 1006 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 CYP21A2P08686 494 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 ACRP10323 421 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 CSF2RAP15509 400 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 PBX2P40425 430 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
MED28-203ENST00000503945 NSUN6Q8TEA1 469 aaKnown RBP13.93□□□□□ -0.18
MED28-203ENST00000503945 MAP4K1Q92918 833 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 TIFAQ96CG3 184 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 JMJD4Q9H9V9 463 aa13.93□□□□□ -0.18
MED28-203ENST00000503945 RBM47A0AV96 593 aaKnown RBP13.92□□□□□ -0.18
MED28-203ENST00000503945 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
MED28-203ENST00000503945 CPT1AP50416 773 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 TRAF1Q13077 416 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 PPIGQ13427 754 aaKnown RBP eCLIP13.92□□□□□ -0.183e-8■□□□□ 10.6
MED28-203ENST00000503945 SEC23AQ15436 765 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms