RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 PDLIM7Q9NR12 457 aa21.32■■□□□ 1
RNF4-204ENST00000503659 ABCB11O95342 1321 aa21.31■■□□□ 1
RNF4-204ENST00000503659 LOC102724159A0A0B4J2E5 919 aa21.31■■□□□ 1
RNF4-204ENST00000503659 KLRF2D3W0D1 207 aa21.31■■□□□ 1
RNF4-204ENST00000503659 TLE2Q04725 743 aa21.31■■□□□ 1
RNF4-204ENST00000503659 TROAPQ12815 778 aa21.31■■□□□ 1
RNF4-204ENST00000503659 GRM4Q14833 912 aa21.31■■□□□ 1
RNF4-204ENST00000503659 WTAPQ15007 396 aa21.31■■□□□ 1
RNF4-204ENST00000503659 PWP2Q15269 919 aaKnown RBP21.31■■□□□ 1
RNF4-204ENST00000503659 TMEM63BQ5T3F8 832 aa21.31■■□□□ 1
RNF4-204ENST00000503659 PCSK9Q8NBP7 692 aaKnown RBP21.31■■□□□ 1
RNF4-204ENST00000503659 RGS22Q8NE09 1264 aa21.31■■□□□ 1
RNF4-204ENST00000503659 IGDCC4Q8TDY8 1250 aa21.31■■□□□ 1
RNF4-204ENST00000503659 MTMR8Q96EF0 704 aa21.31■■□□□ 1
RNF4-204ENST00000503659 TOX2Q96NM4 488 aa21.31■■□□□ 1
RNF4-204ENST00000503659 VAT1LQ9HCJ6 419 aa21.31■■□□□ 1
RNF4-204ENST00000503659 BAZ2BQ9UIF8 2168 aaKnown RBP21.3■■□□□ 1
RNF4-204ENST00000503659 ERICH2A1L162 156 aa21.3■■□□□ 1
RNF4-204ENST00000503659 SLC27A2O14975 620 aa21.3■■□□□ 1
RNF4-204ENST00000503659 DHX16O60231 1041 aaKnown RBP21.3■■□□□ 1
RNF4-204ENST00000503659 SMPD1P17405 629 aa21.3■■□□□ 1
RNF4-204ENST00000503659 EDNRBP24530 442 aa21.3■■□□□ 1
RNF4-204ENST00000503659 NECTIN1Q15223 517 aa21.3■■□□□ 1
RNF4-204ENST00000503659 TMEM67Q5HYA8 995 aa21.3■■□□□ 1
RNF4-204ENST00000503659 TLK2Q86UE8 772 aa21.3■■□□□ 1
RNF4-204ENST00000503659 TBC1D5Q92609 795 aa21.3■■□□□ 1
RNF4-204ENST00000503659 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
RNF4-204ENST00000503659 PRDM5Q9NQX1 630 aaPredicted RBP21.3■■□□□ 1
RNF4-204ENST00000503659 STARD7Q9NQZ5 370 aa21.3■■□□□ 1
RNF4-204ENST00000503659 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
RNF4-204ENST00000503659 ASGR1P07306 291 aa21.29■■□□□ 1
RNF4-204ENST00000503659 SART3Q15020 963 aaKnown RBP21.29■■□□□ 1
RNF4-204ENST00000503659 GNASQ5JWF2 1037 aa21.29■■□□□ 1
RNF4-204ENST00000503659 CREB3L3Q68CJ9 461 aa21.29■■□□□ 1
RNF4-204ENST00000503659 FBXO11Q86XK2 927 aa21.29■■□□□ 1
RNF4-204ENST00000503659 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
RNF4-204ENST00000503659 LY9Q9HBG7 655 aa21.29■■□□□ 1
RNF4-204ENST00000503659 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
RNF4-204ENST00000503659 KIAA1217Q5T5P2 1943 aa21.29■■□□□ 1
RNF4-204ENST00000503659 ELP1O95163 1332 aa21.29■■□□□ 1
RNF4-204ENST00000503659 CLTBP09497 229 aa21.28■■□□□ 1
RNF4-204ENST00000503659 BEX3Q00994 111 aa21.28■■□□□ 1
RNF4-204ENST00000503659 IQSEC1Q6DN90 963 aa21.28■■□□□ 1
RNF4-204ENST00000503659 NOL8Q76FK4 1167 aaKnown RBP21.28■■□□□ 1
RNF4-204ENST00000503659 ANKRD33Q7Z3H0 272 aa21.28■■□□□ 1
RNF4-204ENST00000503659 SH3RF1Q7Z6J0 888 aa21.28■■□□□ 1
RNF4-204ENST00000503659 DEFB123Q8N688 67 aa21.28■■□□□ 1
RNF4-204ENST00000503659 DNERQ8NFT8 737 aa21.28■■□□□ 1
RNF4-204ENST00000503659 MAF1Q9H063 256 aa21.28■■□□□ 1
RNF4-204ENST00000503659 COL20A1Q9P218 1284 aa21.28■■□□□ 1
RNF4-204ENST00000503659 TRIM43BA6NCK2 446 aa21.27■■□□□ 1
RNF4-204ENST00000503659 OPLAHO14841 1288 aa21.27■■□□□ 1
RNF4-204ENST00000503659 KIAA0355O15063 1070 aa21.27■■□□□ 1
RNF4-204ENST00000503659 PRC1O43663 620 aa21.27■■□□□ 1
RNF4-204ENST00000503659 CYTH3O43739 400 aa21.27■■□□□ 1
RNF4-204ENST00000503659 SYTL5Q8TDW5 730 aaPredicted RBP21.27■■□□□ 1
RNF4-204ENST00000503659 BADQ92934 168 aa21.27■■□□□ 1
RNF4-204ENST00000503659 TRIM43Q96BQ3 446 aaPredicted RBP21.27■■□□□ 1
RNF4-204ENST00000503659 GLT1D1Q96MS3 346 aa21.27■■□□□ 1
RNF4-204ENST00000503659 MROH7Q68CQ1 1323 aa21.27■□□□□ 0.99
RNF4-204ENST00000503659 RBM47A0AV96 593 aaKnown RBP21.26■□□□□ 0.99
RNF4-204ENST00000503659 DCDC2CA8MYV0 355 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 ZBTB5O15062 677 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 PQBP1O60828 265 aaKnown RBP21.26■□□□□ 0.99
RNF4-204ENST00000503659 FAM109BQ6ICB4 259 aaPredicted RBP21.26■□□□□ 0.99
RNF4-204ENST00000503659 CATIPQ7Z7H3 387 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 MRPL11Q9Y3B7 192 aaKnown RBP21.26■□□□□ 0.99
RNF4-204ENST00000503659 Q9Y3F1 56 aa21.26■□□□□ 0.99
RNF4-204ENST00000503659 SH2B2O14492 632 aaPredicted RBP21.25■□□□□ 0.99
RNF4-204ENST00000503659 DYNC1LI2O43237 492 aaPredicted RBP21.25■□□□□ 0.99
RNF4-204ENST00000503659 CDC45O75419 566 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 PDE4DQ08499 809 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 FSCN1Q16658 493 aaKnown RBP21.25■□□□□ 0.99
RNF4-204ENST00000503659 DUSP28Q4G0W2 176 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 MTA3Q9BTC8 594 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 WDR11Q9BZH6 1224 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 AP5M1Q9H0R1 490 aa21.25■□□□□ 0.99
RNF4-204ENST00000503659 ITGB8P26012 769 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 MCM5P33992 734 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 CDK7P50613 346 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 GHRHRQ02643 423 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 CASC1Q6TDU7 716 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 HOMER1Q86YM7 354 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 MCF2L2Q86YR7 1114 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 ZNF654Q8IZM8 581 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 PIGSQ96S52 555 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 MPHOSPH6Q99547 160 aaKnown RBP21.24■□□□□ 0.99
RNF4-204ENST00000503659 MYL10Q9BUA6 226 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 TMEM39AQ9NV64 488 aa21.24■□□□□ 0.99
RNF4-204ENST00000503659 A0A0U1RQG5 324 aaPredicted RBP21.23■□□□□ 0.99
RNF4-204ENST00000503659 DDAH1O94760 285 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 RAG1P15918 1043 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 HSD17B4P51659 736 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 FAAP100Q0VG06 881 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 CXCL17Q6UXB2 119 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 TMEM87BQ96K49 555 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 MAP3K14Q99558 947 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms