RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 DHX16O60231 1041 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 PARP1P09874 1014 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 RPS6P62753 249 aaKnown RBP22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 PTH1RQ03431 593 aa22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 SHHQ15465 462 aa22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 ADGRF4Q8IZF3 695 aa22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 NKX3-2P78367 333 aa22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 TRDNQ13061 729 aa22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 FSCN1Q16658 493 aaKnown RBP22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 C9orf50Q5SZB4 431 aa22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 TMEM63BQ5T3F8 832 aa22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 U3KPZ7 1027 aaPredicted RBP22.72■■□□□ 1.23
UBE2D3-215ENST00000503418 LOC102724159A0A0B4J2E5 919 aa22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 ARVCFO00192 962 aa22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 PWP2Q15269 919 aaKnown RBP22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 CXCL17Q6UXB2 119 aa22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 CYB5R4Q7L1T6 521 aa22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 MPHOSPH6Q99547 160 aaKnown RBP22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 VAT1LQ9HCJ6 419 aa22.71■■□□□ 1.23
UBE2D3-215ENST00000503418 ZEB2O60315 1214 aa22.7■■□□□ 1.22
UBE2D3-215ENST00000503418 CYP21A2P08686 494 aa22.7■■□□□ 1.22
UBE2D3-215ENST00000503418 CDK7P50613 346 aa22.7■■□□□ 1.22
UBE2D3-215ENST00000503418 PDE4DQ08499 809 aa22.7■■□□□ 1.22
UBE2D3-215ENST00000503418 Q9Y3F1 56 aa22.7■■□□□ 1.22
UBE2D3-215ENST00000503418 ABCB11O95342 1321 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 SGSM2O43147 1006 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 FPGSQ05932 587 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 SEC23AQ15436 765 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 QRICH1Q2TAL8 776 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 DNERQ8NFT8 737 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 WDR11Q9BZH6 1224 aa22.69■■□□□ 1.22
UBE2D3-215ENST00000503418 TLR3O15455 904 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 CABYRO75952 493 aa22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 DUSP28Q4G0W2 176 aa22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 STAG2Q8N3U4 1231 aa22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 TBX21Q9UL17 535 aa22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 LAMA2P24043 3122 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-215ENST00000503418 B4DLN1 442 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 TIMP1P01033 207 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 MRPL12P52815 198 aaKnown RBP22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 EPHB4P54760 987 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 FBXO11Q86XK2 927 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 FAM126BQ8IXS8 530 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 JMJD4Q9H9V9 463 aa22.67■■□□□ 1.22
UBE2D3-215ENST00000503418 ERICH2A1L162 156 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 IFIT3O14879 490 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 EDNRBP24530 442 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 ITGA7Q13683 1181 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 PPP2R5BQ15173 497 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 RGS22Q8NE09 1264 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 OR6J1Q8NGC5 347 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 TBC1D5Q92609 795 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 RNPC3Q96LT9 517 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 MTMR10Q9NXD2 777 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 MRPL11Q9Y3B7 192 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 TAF6LQ9Y6J9 622 aa22.66■■□□□ 1.22
UBE2D3-215ENST00000503418 RBM47A0AV96 593 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 KLRF2D3W0D1 207 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 E7EWF7 191 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 PSMC6P62333 389 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 MCF2L2Q86YR7 1114 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 NCOA7Q8NI08 942 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 PPP1R12CQ9BZL4 782 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 MAD2L2Q9UI95 211 aa22.65■■□□□ 1.22
UBE2D3-215ENST00000503418 SART3Q15020 963 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-215ENST00000503418 SLC43A3Q8NBI5 491 aa22.64■■□□□ 1.21
UBE2D3-215ENST00000503418 SYTL5Q8TDW5 730 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-215ENST00000503418 SCFD2Q8WU76 684 aa22.64■■□□□ 1.21
UBE2D3-215ENST00000503418 FAM161BQ96MY7 647 aa22.64■■□□□ 1.21
UBE2D3-215ENST00000503418 CD4P01730 458 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 MYL3P08590 195 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 CPT1AP50416 773 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 WTAPQ15007 396 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 ZNF697Q5TEC3 545 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 MFSD5Q6N075 450 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 STOX1Q6ZVD7 989 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 MAP4K1Q92918 833 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 TAAR1Q96RJ0 339 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 AMNQ9BXJ7 453 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 MAF1Q9H063 256 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 SENP2Q9HC62 589 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 COL20A1Q9P218 1284 aa22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 RBM8AQ9Y5S9 174 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-215ENST00000503418 GRIN2DO15399 1336 aa22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 NKRFO15226 690 aaKnown RBP eCLIP22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 CFBP00751 764 aa22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 TXNP10599 105 aaKnown RBP22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 HOMER1Q86YM7 354 aa22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 NSUN6Q8TEA1 469 aaKnown RBP22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 COPS5Q92905 334 aa22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 POLR3EQ9NVU0 708 aa22.62■■□□□ 1.21
UBE2D3-215ENST00000503418 PALM3A6NDB9 673 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-215ENST00000503418 PPIGQ13427 754 aaKnown RBP eCLIP22.61■■□□□ 1.215e-7■□□□□ 10
UBE2D3-215ENST00000503418 TTLL4Q14679 1199 aa22.61■■□□□ 1.21
UBE2D3-215ENST00000503418 GRM4Q14833 912 aa22.61■■□□□ 1.21
UBE2D3-215ENST00000503418 BRDTQ58F21 947 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-215ENST00000503418 TMEM67Q5HYA8 995 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms