RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-203ENST00000503274 IQCEQ6IPM2 695 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 NSMFQ6X4W1 530 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 NUP43Q8NFH3 380 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 C1orf159Q96HA4 380 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 ACSL6Q9UKU0 697 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
NIPBL-203ENST00000503274 DLX3O60479 287 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 PABPC1P11940 636 aaKnown RBP8.7□□□□□ -1.02
NIPBL-203ENST00000503274 GALK1P51570 392 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 LONRF2Q1L5Z9 754 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 ACBD5Q5T8D3 534 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-203ENST00000503274 YOD1Q5VVQ6 348 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-203ENST00000503274 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 NLGN2Q8NFZ4 835 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 PIF1Q9H611 641 aa8.7□□□□□ -1.02
NIPBL-203ENST00000503274 NACADO15069 1562 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 ZNF503-AS2A6NEH8 195 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-203ENST00000503274 FAM153BP0C7A2 387 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
NIPBL-203ENST00000503274 MVKQ03426 396 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 PPIL6Q8IXY8 311 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 OSBP2Q969R2 916 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 CDC6Q99741 560 aa8.69□□□□□ -1.02
NIPBL-203ENST00000503274 TMEFF2Q9UIK5 374 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-203ENST00000503274 C7orf72A4D263 438 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-203ENST00000503274 ARNTLO00327 626 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 NPHS1O60500 1241 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 PNLIPP16233 465 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 CORO7P57737 925 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 CYP4F8P98187 520 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 KCNAB2Q13303 367 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 MBLAC2Q68D91 279 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 DENND5AQ6IQ26 1287 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 MPZL3Q6UWV2 235 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 JMYQ8N9B5 988 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 DIO2Q92813 273 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 LIN37Q96GY3 246 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-203ENST00000503274 INTS4Q96HW7 963 aaKnown RBP8.68□□□□□ -1.02
NIPBL-203ENST00000503274 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
NIPBL-203ENST00000503274 SLC6A17Q9H1V8 727 aa8.68□□□□□ -1.02
NIPBL-203ENST00000503274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-203ENST00000503274 ARL4AP40617 200 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 RBM10P98175 930 aaKnown RBP8.67□□□□□ -1.02
NIPBL-203ENST00000503274 TESK1Q15569 626 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 INF2Q27J81 1249 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
NIPBL-203ENST00000503274 CCDC103Q8IW40 242 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 THAP3Q8WTV1 239 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-203ENST00000503274 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 RNF114Q9Y508 228 aa8.67□□□□□ -1.02
NIPBL-203ENST00000503274 TRBV23-1A0A0A0MS06 115 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 MSL3P1P0C860 447 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 LTBRP36941 435 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 SLC26A8Q96RN1 970 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
NIPBL-203ENST00000503274 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 A0A1W2PQJ5 194 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 PDE6BP35913 854 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 C2orf27AQ580R0 203 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 USP53Q70EK8 1073 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 IRF2BP1Q8IU81 584 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 DHRS4Q9BTZ2 278 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 GULP1Q9UBP9 304 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 NPFFR2Q9Y5X5 522 aa8.65□□□□□ -1.02
NIPBL-203ENST00000503274 PPP1R11O60927 126 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-203ENST00000503274 ADGRF1Q5T601 910 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 LZTR1Q8N653 840 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 RCBTB1Q8NDN9 531 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 ZSWIM2Q8NEG5 633 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 DCAF4Q8WV16 495 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 EXOC2Q96KP1 924 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.64□□□□□ -1.03
NIPBL-203ENST00000503274 RWDD3Q9Y3V2 267 aa8.64□□□□□ -1.03
NIPBL-203ENST00000503274 TIMM13Q9Y5L4 95 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-203ENST00000503274 IGSF3O75054 1194 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 TACR1P25103 407 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 ERVFRD-1P60508 538 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
NIPBL-203ENST00000503274 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
NIPBL-203ENST00000503274 NTRK3Q16288 839 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 RSPO2Q6UXX9 243 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-203ENST00000503274 DPF3Q92784 378 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
NIPBL-203ENST00000503274 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
NIPBL-203ENST00000503274 BLACEA4D250 179 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 OR14I1A6ND48 311 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 LRRC10BA6NIK2 292 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 MYO1BO43795 1136 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 MPOP05164 745 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms