RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 MED15Q96RN5 788 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 MMTAG2Q9BU76 263 aaKnown RBP20.61■□□□□ 0.89
LINC00535-201ENST00000501400 DEFB129Q9H1M3 183 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 KCNF1Q9H3M0 494 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 SH2D4AQ9H788 454 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 MSNP26038 577 aaKnown RBP20.61■□□□□ 0.89
LINC00535-201ENST00000501400 FXR2P51116 673 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC00535-201ENST00000501400 AP3B2Q13367 1082 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 CABP7Q86V35 215 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 TRPM4Q8TD43 1214 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 ATP1A3P13637 1013 aa20.6■□□□□ 0.89
LINC00535-201ENST00000501400 LMOD1P29536 600 aaPredicted RBP20.6■□□□□ 0.89
LINC00535-201ENST00000501400 TXKP42681 527 aa20.6■□□□□ 0.89
LINC00535-201ENST00000501400 RRAGBQ5VZM2 374 aa20.6■□□□□ 0.89
LINC00535-201ENST00000501400 RANBP17Q9H2T7 1088 aaKnown RBP20.6■□□□□ 0.89
LINC00535-201ENST00000501400 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
LINC00535-201ENST00000501400 DDX25Q9UHL0 483 aaKnown RBP20.6■□□□□ 0.89
LINC00535-201ENST00000501400 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
LINC00535-201ENST00000501400 PLA2G6O60733 806 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 CD44P16070 742 aaKnown RBP20.59■□□□□ 0.89
LINC00535-201ENST00000501400 GCFC2P16383 781 aaKnown RBP20.59■□□□□ 0.89
LINC00535-201ENST00000501400 PLCG1P19174 1290 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 NBPF12Q5TAG4 269 aaPredicted RBP20.59■□□□□ 0.89
LINC00535-201ENST00000501400 HAS1Q92839 578 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 PLIN2Q99541 437 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 ZNF341Q9BYN7 854 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 CCDC144BQ3MJ40 725 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
LINC00535-201ENST00000501400 FBXO28Q9NVF7 368 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 GPRC5DQ9NZD1 345 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
LINC00535-201ENST00000501400 GOLGA6L6A8MZA4 724 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 LMNB1P20700 586 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 PTGS1P23219 599 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 TRMT44Q8IYL2 757 aaKnown RBP20.58■□□□□ 0.88
LINC00535-201ENST00000501400 RASSF8Q8NHQ8 419 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 MBOAT7Q96N66 472 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 KBTBD4Q9NVX7 518 aa20.58■□□□□ 0.88
LINC00535-201ENST00000501400 POTEMA6NI47 508 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 TPM4P67936 248 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 ANGEL2Q5VTE6 544 aaKnown RBP20.57■□□□□ 0.88
LINC00535-201ENST00000501400 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 SMYD4Q8IYR2 804 aaPredicted RBP20.57■□□□□ 0.88
LINC00535-201ENST00000501400 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 XPO4Q9C0E2 1151 aaKnown RBP20.57■□□□□ 0.88
LINC00535-201ENST00000501400 CYP3A7-CYP3A51PA0A087WV96 503 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 ZNF500O60304 480 aaPredicted RBP20.57■□□□□ 0.88
LINC00535-201ENST00000501400 CYP3A7P24462 503 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 INPP5BP32019 993 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 CCDC186Q7Z3E2 898 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 DRC7Q8IY82 874 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 ENOX1Q8TC92 643 aaKnown RBP20.57■□□□□ 0.88
LINC00535-201ENST00000501400 CHURC1Q8WUH1 139 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 FEZ1Q99689 392 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 FANCLQ9NW38 375 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 IFNKQ9P0W0 207 aa20.57■□□□□ 0.88
LINC00535-201ENST00000501400 SRCAPQ6ZRS2 3230 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 SSC5DA1L4H1 1573 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 PARP14Q460N5 1801 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 PPP1R3GB7ZBB8 358 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 H7C1D1 291 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 CTNND1O60716 968 aaKnown RBP20.56■□□□□ 0.88
LINC00535-201ENST00000501400 USP11P51784 963 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 FANCCQ00597 558 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 FAM160B2Q86V87 743 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 GPC2Q8N158 579 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 GJA10Q969M2 543 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 CUEDC2Q9H467 287 aa20.56■□□□□ 0.88
LINC00535-201ENST00000501400 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 PIK3CDO00329 1044 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 RPN1P04843 607 aaKnown RBP20.55■□□□□ 0.88
LINC00535-201ENST00000501400 ZNF18P17022 549 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 ERCC5P28715 1186 aaPredicted RBP20.55■□□□□ 0.88
LINC00535-201ENST00000501400 SREBF1P36956 1147 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 GRB10Q13322 594 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 DGKZQ13574 1117 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 TMEM266Q2M3C6 531 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 CCDC174Q6PII3 467 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 MOXD1Q6UVY6 613 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 NAP1L4Q99733 375 aaKnown RBP20.55■□□□□ 0.88
LINC00535-201ENST00000501400 KIAA1683Q9H0B3 1180 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 LRWD1Q9UFC0 647 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 FEM1BQ9UK73 627 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 NFE2L3Q9Y4A8 694 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
LINC00535-201ENST00000501400 MCTP2Q6DN12 878 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 APOBEC3FQ8IUX4 373 aaKnown RBP20.55■□□□□ 0.88
LINC00535-201ENST00000501400 PNMA5Q96PV4 448 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 MAGEF1Q9HAY2 307 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 GGA3Q9NZ52 723 aa20.55■□□□□ 0.88
LINC00535-201ENST00000501400 KLRC4O43908 158 aa20.54■□□□□ 0.88
LINC00535-201ENST00000501400 TPM3P06753 285 aa20.54■□□□□ 0.88
LINC00535-201ENST00000501400 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
LINC00535-201ENST00000501400 PDIA5Q14554 519 aa20.54■□□□□ 0.88
LINC00535-201ENST00000501400 CT47A1Q5JQC4 288 aaPredicted RBP20.54■□□□□ 0.88
LINC00535-201ENST00000501400 LENG9Q96B70 501 aa20.54■□□□□ 0.88
LINC00535-201ENST00000501400 NUDT12Q9BQG2 462 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms