RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 USH1GQ495M9 461 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 STOX1Q6ZVD7 989 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 TLK2Q86UE8 772 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 STAG2Q8N3U4 1231 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 TBC1D5Q92609 795 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
HMGCL-207ENST00000498698 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 A0A0U1RQG5 324 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-207ENST00000498698 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-207ENST00000498698 DCDC2CA8MYV0 355 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 ARVCFO00192 962 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 IFIT3O14879 490 aaKnown RBP11.05□□□□□ -0.64
HMGCL-207ENST00000498698 SHHQ15465 462 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 FSCN1Q16658 493 aaKnown RBP11.05□□□□□ -0.64
HMGCL-207ENST00000498698 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 DUSP28Q4G0W2 176 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 CXCL17Q6UXB2 119 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 SLC43A3Q8NBI5 491 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 MTMR8Q96EF0 704 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 VAT1LQ9HCJ6 419 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 MAD2L2Q9UI95 211 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 TBX21Q9UL17 535 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
HMGCL-207ENST00000498698 ABCB11O95342 1321 aa11.05□□□□□ -0.64
HMGCL-207ENST00000498698 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
HMGCL-207ENST00000498698 CABYRO75952 493 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 RAG1P15918 1043 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 EPHB4P54760 987 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 ANTXR2P58335 489 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 PDE4DQ08499 809 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
HMGCL-207ENST00000498698 FAM126BQ8IXS8 530 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 SYTL5Q8TDW5 730 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-207ENST00000498698 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 WDR11Q9BZH6 1224 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 LSG1Q9H089 658 aaKnown RBP11.04□□□□□ -0.64
HMGCL-207ENST00000498698 COL20A1Q9P218 1284 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 MRPL11Q9Y3B7 192 aaKnown RBP11.04□□□□□ -0.64
HMGCL-207ENST00000498698 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
HMGCL-207ENST00000498698 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 FRMPD3Q5JV73 1810 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 B4DLN1 442 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 OPLAHO14841 1288 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 ZEB2O60315 1214 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 PPP1R11O60927 126 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 TIMP1P01033 207 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 CD4P01730 458 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 MRPL12P52815 198 aaKnown RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 GHRHRQ02643 423 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 TROAPQ12815 778 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 GRM4Q14833 912 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 CHST3Q7LGC8 479 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 MCF2L2Q86YR7 1114 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 TAAR1Q96RJ0 339 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
HMGCL-207ENST00000498698 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 RIOX1Q9H6W3 641 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 MROH7Q68CQ1 1323 aa11.03□□□□□ -0.64
HMGCL-207ENST00000498698 DNAH12Q6ZR08 3092 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 ERICH2A1L162 156 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 ZBTB5O15062 677 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 FPGSQ05932 587 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 ITGA7Q13683 1181 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-207ENST00000498698 WTAPQ15007 396 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
HMGCL-207ENST00000498698 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 TMEM67Q5HYA8 995 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 CCDC62Q6P9F0 684 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 Q7L0L9 218 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 DEFB123Q8N688 67 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 NSUN6Q8TEA1 469 aaKnown RBP11.02□□□□□ -0.65
HMGCL-207ENST00000498698 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 SEZ6LQ9BYH1 1024 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 MTMR10Q9NXD2 777 aa11.02□□□□□ -0.65
HMGCL-207ENST00000498698 SLC27A2O14975 620 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 TLR3O15455 904 aaKnown RBP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 CYTH3O43739 400 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 ARIH2O95376 493 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 HSD17B4P51659 736 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PSMC6P62333 389 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PURAQ00577 322 aaKnown RBP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PPP2R5BQ15173 497 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms