RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 USP17L5A8MUK1 530 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 H3BNC9 293 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 HTATSF1O43719 755 aaKnown RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 GDF9O60383 454 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 GJB5O95377 273 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 HOXD8P13378 290 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 AKR1A1P14550 325 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 PTGS1P23219 599 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 NDUFV1P49821 464 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 CCNA1P78396 465 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 BEX3Q00994 111 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 LAPTM4AQ15012 233 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 ZSCAN29Q8IWY8 852 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 PNISRQ8TF01 805 aaKnown RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 GATA6Q92908 595 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 RAD9AQ99638 391 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 PRKD2Q9BZL6 878 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 FTOQ9C0B1 505 aaKnown RBP eCLIP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 DDX4Q9NQI0 724 aaKnown RBP6.06□□□□□ -1.44
CSTF1-207ENST00000498689 USP40Q9NVE5 1235 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 TMOD4Q9NZQ9 345 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 ACACAQ13085 2346 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 NOTCH2Q04721 2471 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 SALL1Q9NSC2 1324 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 EIF4E1BA6NMX2 242 aaKnown RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 GLP2RO95838 553 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 ASGR2P07307 311 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 CST5P28325 142 aaPredicted RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 HIBADHP31937 336 aaKnown RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 KCNJ6P48051 423 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 PSMC6P62333 389 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 MTMR3Q13615 1198 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 COL28A1Q2UY09 1125 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 TRAF7Q6Q0C0 670 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 CXCL17Q6UXB2 119 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 CCDC191Q8NCU4 936 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 GLIS3Q8NEA6 775 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 PPP1R13LQ8WUF5 828 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 MRIQ9BWK5 157 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 MOV10L1Q9BXT6 1211 aaKnown RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 TRMT13Q9NUP7 481 aaKnown RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 CWC25Q9NXE8 425 aaPredicted RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 BARX2Q9UMQ3 279 aaPredicted RBP6.05□□□□□ -1.44
CSTF1-207ENST00000498689 GPSM3Q9Y4H4 160 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 RAI2Q9Y5P3 530 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 C2orf16Q68DN1 1984 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 NF1P21359 2839 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 SPAG17Q6Q759 2223 aa6.05□□□□□ -1.44
CSTF1-207ENST00000498689 PYCARD-AS1I3L0S3 204 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 NCK2O43639 380 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 FRAT2O75474 233 aaPredicted RBP6.04□□□□□ -1.44
CSTF1-207ENST00000498689 PGK2P07205 417 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 CAP2P40123 477 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 RBM10P98175 930 aaKnown RBP6.04□□□□□ -1.44
CSTF1-207ENST00000498689 SPEM2Q0P670 501 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 COASYQ13057 564 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 ITGA7Q13683 1181 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 GPNMBQ14956 572 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 GNASQ5JWF2 1037 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 ZC3H14Q6PJT7 736 aaKnown RBP6.04□□□□□ -1.44
CSTF1-207ENST00000498689 ADGRD2Q7Z7M1 963 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 UBALD2Q8IYN6 164 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 GPR161Q8N6U8 529 aaKnown RBP6.04□□□□□ -1.44
CSTF1-207ENST00000498689 SHCBP1Q8NEM2 672 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 MAP4K1Q92918 833 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 MTRQ99707 1265 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 TINF2Q9BSI4 451 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 TSPYL4Q9UJ04 414 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 CDH22Q9UJ99 828 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 SORCS3Q9UPU3 1222 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
CSTF1-207ENST00000498689 LCE2BO14633 110 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 GRM6O15303 877 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 IQCF3P0C7M6 154 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 ERCC3P19447 782 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PRSS12P56730 875 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 EIF4G2P78344 907 aaKnown RBP eCLIP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 C19orf57Q0VDD7 668 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PPP1R18Q6NYC8 613 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 MAML2Q8IZL2 1156 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 ZNF513Q8N8E2 541 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PCSK9Q8NBP7 692 aaKnown RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 GTF3C2Q8WUA4 911 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 CRBNQ96SW2 442 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 WDR18Q9BV38 432 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 OSBPL5Q9H0X9 879 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PHAXQ9H814 394 aaKnown RBP6.03□□□□□ -1.44
CSTF1-207ENST00000498689 IL21Q9HBE4 155 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 MYH1P12882 1939 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PLXNB3Q9ULL4 1909 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 PTPRQQ9UMZ3 2332 aa6.03□□□□□ -1.44
CSTF1-207ENST00000498689 ASTN1O14525 1302 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 CENPEQ02224 2701 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 APC2O95996 2303 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 TMEM8BA6NDV4 472 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 SPDYE16A6NNV3 312 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 STRNO43815 780 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms