RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 CALML3P27482 149 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 PSMA5P28066 241 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 SGMS1Q86VZ5 419 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 MORC4Q8TE76 937 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 KCNB2Q92953 911 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 VTA1Q9NP79 307 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 SMCHD1A6NHR9 2005 aa12.2□□□□□ -0.46
FXR1-222ENST00000498658 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 FGD1P98174 961 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 LRRC41Q15345 812 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 GJC2Q5T442 439 aaPredicted RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 IQSEC1Q6DN90 963 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 SPZ1Q9BXG8 430 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 SENP6Q9GZR1 1112 aaPredicted RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 SEC63Q9UGP8 760 aaKnown RBP12.19□□□□□ -0.46
FXR1-222ENST00000498658 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
FXR1-222ENST00000498658 MOXD2PA6NHM9 499 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 RCAN1P53805 252 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 GHRHRQ02643 423 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 PDE4DQ08499 809 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 FANCBQ8NB91 859 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
FXR1-222ENST00000498658 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
FXR1-222ENST00000498658 IWS1Q96ST2 819 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 KATNBL1Q9H079 304 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
FXR1-222ENST00000498658 Q9Y3F1 56 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 MCM3APO60318 1980 aa12.18□□□□□ -0.46
FXR1-222ENST00000498658 H0YGN5 161 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 CYTH3O43739 400 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 PGK1P00558 417 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 EDNRBP24530 442 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 CST5P28325 142 aaPredicted RBP12.17□□□□□ -0.46
FXR1-222ENST00000498658 GJA9P57773 515 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 NKX3-2P78367 333 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
FXR1-222ENST00000498658 SYTL5Q8TDW5 730 aaPredicted RBP12.17□□□□□ -0.46
FXR1-222ENST00000498658 PIGSQ96S52 555 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 GPHNQ9NQX3 736 aaPredicted RBP12.17□□□□□ -0.46
FXR1-222ENST00000498658 PHF24Q9UPV7 400 aa12.17□□□□□ -0.46
FXR1-222ENST00000498658 ASTN1O14525 1302 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 DNAH12Q6ZR08 3092 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
FXR1-222ENST00000498658 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
FXR1-222ENST00000498658 ZBTB43O43298 467 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 ZEB2O60315 1214 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 CFBP00751 764 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 C6orf222P0C671 652 aaPredicted RBP12.16□□□□□ -0.46
FXR1-222ENST00000498658 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 ADCYAP1R1P41586 468 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 HSD17B4P51659 736 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 C1orf53Q5VUE5 145 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 KLHDC9Q8NEP7 349 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
FXR1-222ENST00000498658 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
FXR1-222ENST00000498658 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 MYL10Q9BUA6 226 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
FXR1-222ENST00000498658 SNX14Q9Y5W7 946 aa12.16□□□□□ -0.46
FXR1-222ENST00000498658 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
FXR1-222ENST00000498658 PPP1R11O60927 126 aaPredicted RBP12.15□□□□□ -0.46
FXR1-222ENST00000498658 ACLYP53396 1101 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 STXBP2Q15833 593 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 LRRC26Q2I0M4 334 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
FXR1-222ENST00000498658 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 FBXO16Q8IX29 292 aaPredicted RBP12.15□□□□□ -0.46
FXR1-222ENST00000498658 C7orf61Q8IZ16 206 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 SCFD2Q8WU76 684 aa12.15□□□□□ -0.46
FXR1-222ENST00000498658 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms