RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
PUDP-205ENST00000498474 BTBD7Q9P203 1132 aa9.56□□□□□ -0.88
PUDP-205ENST00000498474 SLC4A4Q9Y6R1 1079 aa9.56□□□□□ -0.88
PUDP-205ENST00000498474 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
PUDP-205ENST00000498474 COL11A1P12107 1806 aaPredicted RBP9.56□□□□□ -0.88
PUDP-205ENST00000498474 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
PUDP-205ENST00000498474 GPC1P35052 558 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 CDK8P49336 464 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 C12orf60Q5U649 245 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 WDR78Q5VTH9 848 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 CTR9Q6PD62 1173 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 RIPOR1Q6ZS17 1223 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 GPR142Q7Z601 462 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 SIAH1Q8IUQ4 282 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 SPICE1Q8N0Z3 855 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 OSBP2Q969R2 916 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 C12orf42Q96LP6 360 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 SEC62Q99442 399 aaKnown RBP9.55□□□□□ -0.88
PUDP-205ENST00000498474 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.55□□□□□ -0.88
PUDP-205ENST00000498474 KIAA1683Q9H0B3 1180 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 ECHDC1Q9NTX5 307 aa9.55□□□□□ -0.88
PUDP-205ENST00000498474 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
PUDP-205ENST00000498474 M0R2C6 588 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 TRAK2O60296 914 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 HMGCRP04035 888 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 USP14P54578 494 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 RRP1P56182 461 aaKnown RBP9.54□□□□□ -0.88
PUDP-205ENST00000498474 ATP2B2Q01814 1243 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 UBE3CQ15386 1083 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
PUDP-205ENST00000498474 CCAR1Q8IX12 1150 aaKnown RBP9.54□□□□□ -0.88
PUDP-205ENST00000498474 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 TMEM151AQ8N4L1 468 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 PAWRQ96IZ0 340 aaKnown RBP9.54□□□□□ -0.88
PUDP-205ENST00000498474 GRIP2Q9C0E4 1043 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.54□□□□□ -0.88
PUDP-205ENST00000498474 PAK6Q9NQU5 681 aaPredicted RBP9.54□□□□□ -0.88
PUDP-205ENST00000498474 RAB6BQ9NRW1 208 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 ATP8A2Q9NTI2 1148 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 FLRT1Q9NZU1 646 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 PARP14Q460N5 1801 aa9.54□□□□□ -0.88
PUDP-205ENST00000498474 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 CCND3P30281 292 aaPredicted RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 SRSF11Q05519 484 aaKnown RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 CACNB2Q08289 660 aaPredicted RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 CLN3Q13286 438 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 C16orf86Q6ZW13 317 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 PLEKHH3Q7Z736 793 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 USP6NLQ92738 828 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 STRBPQ96SI9 672 aaKnown RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 GAS2L1Q99501 681 aaPredicted RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
PUDP-205ENST00000498474 RPTORQ8N122 1335 aa9.53□□□□□ -0.88
PUDP-205ENST00000498474 MYH4Q9Y623 1939 aa9.52□□□□□ -0.88
PUDP-205ENST00000498474 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 RNF113AO15541 343 aaKnown RBP9.52□□□□□ -0.89
PUDP-205ENST00000498474 RAD21O60216 631 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 EEF2P13639 858 aaKnown RBP9.52□□□□□ -0.89
PUDP-205ENST00000498474 MAPK4P31152 587 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
PUDP-205ENST00000498474 ICA1Q05084 483 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 TMEM179Q6ZVK1 233 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 CYP2U1Q7Z449 544 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 KBTBD3Q8NAB2 608 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 NPLOC4Q8TAT6 608 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 CHMP4CQ96CF2 233 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 ATG4CQ96DT6 458 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 EPB41L4AQ9HCS5 686 aaPredicted RBP9.52□□□□□ -0.89
PUDP-205ENST00000498474 FBXO28Q9NVF7 368 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 RABGAP1Q9Y3P9 1069 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 DYRK1BQ9Y463 629 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 FRMPD3Q5JV73 1810 aa9.52□□□□□ -0.89
PUDP-205ENST00000498474 GPAA1O43292 621 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 PRDM1O75626 825 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 CELA2BP08218 269 aaPredicted RBP9.51□□□□□ -0.89
PUDP-205ENST00000498474 ZKSCAN1P17029 563 aaPredicted RBP9.51□□□□□ -0.89
PUDP-205ENST00000498474 IRS1P35568 1242 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 PLS1Q14651 629 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 COG2Q14746 738 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 TSGA10IPQ3SY00 556 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 ZSCAN25Q6NSZ9 544 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 CCDC129Q6ZRS4 1044 aa9.51□□□□□ -0.89
PUDP-205ENST00000498474 GTPBP3Q969Y2 492 aaKnown RBP9.51□□□□□ -0.89
PUDP-205ENST00000498474 NUP88Q99567 741 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms