RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TCHHQ07283 1943 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 GCOM1H8Y6P7 765 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-227ENST00000498056 MMP1P03956 469 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 POLR2MP0CAP2 368 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 FCER1AP12319 257 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 GNA11P29992 359 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 KRT2P35908 639 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 GNL2Q13823 731 aaKnown RBP15.57■□□□□ 0.08
CPNE1-227ENST00000498056 LARP1BQ659C4 914 aaKnown RBP15.57■□□□□ 0.08
CPNE1-227ENST00000498056 PLEKHH3Q7Z736 793 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
CPNE1-227ENST00000498056 JMYQ8N9B5 988 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 RIC8AQ9NPQ8 531 aa15.57■□□□□ 0.08
CPNE1-227ENST00000498056 FKTNO75072 461 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 ADORA2AP29274 412 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 PSMC4P43686 418 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 USP17L6PQ6QN14 398 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 FCHSD1Q86WN1 690 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 DIS3L2Q8IYB7 885 aaKnown RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 FAM177A1Q8N128 213 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 BICD2Q8TD16 824 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 ZNF296Q8WUU4 475 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 PGBD1Q96JS3 809 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
CPNE1-227ENST00000498056 ZMYND12Q9H0C1 365 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 GLT8D2Q9H1C3 349 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 CYP39A1Q9NYL5 469 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 PCDHA4Q9UN74 947 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 FRMPD3Q5JV73 1810 aa15.56■□□□□ 0.08
CPNE1-227ENST00000498056 PGK2P07205 417 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 SYT1P21579 422 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 CTGFP29279 349 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 HSD17B4P51659 736 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 MRPL12P52815 198 aaKnown RBP15.55■□□□□ 0.08
CPNE1-227ENST00000498056 BAATQ14032 418 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-227ENST00000498056 GRB14Q14449 540 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 BLIDQ8IZY5 108 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 DAGLBQ8NCG7 672 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 FBXO18Q8NFZ0 1043 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 SOCS4Q8WXH5 440 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 TMEM260Q9NX78 707 aa15.55■□□□□ 0.08
CPNE1-227ENST00000498056 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-227ENST00000498056 SPDYE3A6NKU9 549 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 POTEB2H3BUK9 544 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 MEIS2O14770 477 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 ADAMTS3O15072 1205 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 STX6O43752 255 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 PTPREP23469 700 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 NPY5RQ15761 445 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 GALNT17Q6IS24 598 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPNE1-227ENST00000498056 OXER1Q8TDS5 423 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 TRIM47Q96LD4 638 aa15.54■□□□□ 0.08
CPNE1-227ENST00000498056 SLC15A5A6NIM6 579 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 PIK3CDO00329 1044 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 FOXN1O15353 648 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 GHRHRQ02643 423 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 NR5A1Q13285 461 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 AP3B2Q13367 1082 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
CPNE1-227ENST00000498056 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-227ENST00000498056 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 SYTL5Q8TDW5 730 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-227ENST00000498056 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-227ENST00000498056 PURBQ96QR8 312 aaKnown RBP15.53■□□□□ 0.08
CPNE1-227ENST00000498056 ANO3Q9BYT9 981 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 EHMT1Q9H9B1 1298 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 COL20A1Q9P218 1284 aa15.53■□□□□ 0.08
CPNE1-227ENST00000498056 CCDC194A0A1B0GVG4 234 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 BTBD18B2RXH4 712 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 STRNO43815 780 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 HSPA8P11142 646 aaKnown RBP15.52■□□□□ 0.08
CPNE1-227ENST00000498056 EIF2AK2P19525 551 aaKnown RBP15.52■□□□□ 0.08
CPNE1-227ENST00000498056 CLK2P49760 499 aaKnown RBP15.52■□□□□ 0.08
CPNE1-227ENST00000498056 UBXN2AP68543 259 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 CNTN2Q02246 1040 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 MAP2K5Q13163 448 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 PKP1Q13835 747 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 DPP9Q86TI2 863 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 SAMD3Q8N6K7 520 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 RGS22Q8NE09 1264 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 APBA2Q99767 749 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 NUDT12Q9BQG2 462 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 PCDHA6Q9UN73 950 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 MTMR6Q9Y217 621 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 PCDHA8Q9Y5H6 950 aa15.52■□□□□ 0.08
CPNE1-227ENST00000498056 WDR81Q562E7 1941 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 FAM205CA6NFA0 338 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 KIF28PB7ZC32 967 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 CYP2B6P20813 491 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms