RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
NEB-217ENST00000498015 LAMA2P24043 3122 aaKnown RBP8.54□□□□□ -1.04
NEB-217ENST00000498015 ASTN1O14525 1302 aa8.54□□□□□ -1.04
NEB-217ENST00000498015 ELP1O95163 1332 aa8.54□□□□□ -1.04
NEB-217ENST00000498015 NEDD4P46934 1319 aa8.54□□□□□ -1.04
NEB-217ENST00000498015 MYO9BQ13459 2157 aa8.54□□□□□ -1.04
NEB-217ENST00000498015 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 A0A0U1RQG5 324 aaPredicted RBP8.53□□□□□ -1.04
NEB-217ENST00000498015 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 ZNF213O14771 459 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 CTAGE5O15320 804 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 SGSM2O43147 1006 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
NEB-217ENST00000498015 PTGS1P23219 599 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 EPHB4P54760 987 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 NUCB2P80303 420 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 ZNF543Q08ER8 600 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 FBXO16Q8IX29 292 aaPredicted RBP8.53□□□□□ -1.04
NEB-217ENST00000498015 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 TTC14Q96N46 770 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 ALDH8A1Q9H2A2 487 aaPredicted RBP8.53□□□□□ -1.04
NEB-217ENST00000498015 PDGFCQ9NRA1 345 aa8.53□□□□□ -1.04
NEB-217ENST00000498015 ARVCFO00192 962 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 NFIBO00712 420 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 KDM4AO75164 1064 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 GOLGA8HP0CJ92 632 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 SNHG28P0DPA3 235 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 SMPD1P17405 629 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 CALML3P27482 149 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 HSPA4P34932 840 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 CDK7P50613 346 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 NKX3-2P78367 333 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 FPGSQ05932 587 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 RNF20Q5VTR2 975 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 IQSEC1Q6DN90 963 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 FAM109BQ6ICB4 259 aaPredicted RBP8.52□□□□□ -1.05
NEB-217ENST00000498015 TAPT1Q6NXT6 567 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 CXCL17Q6UXB2 119 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 TLK2Q86UE8 772 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 DGKHQ86XP1 1220 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 UBA5Q9GZZ9 404 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 VTA1Q9NP79 307 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
NEB-217ENST00000498015 PNMA2Q9UL42 364 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 GNEQ9Y223 722 aaKnown RBP8.52□□□□□ -1.05
NEB-217ENST00000498015 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 MROH7Q68CQ1 1323 aa8.52□□□□□ -1.05
NEB-217ENST00000498015 COL6A3P12111 3177 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 B4E1Z4 1266 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 TLR3O15455 904 aaKnown RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 ZEB2O60315 1214 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 CABYRO75952 493 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 TIMP1P01033 207 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 PSMA5P28066 241 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 DDIT3P35638 169 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 FSCN1Q16658 493 aaKnown RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 SKOR2Q2VWA4 1001 aaPredicted RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 CCDC178Q5BJE1 867 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 TMEM63BQ5T3F8 832 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 GPATCH4Q5T3I0 446 aaKnown RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 SLC30A10Q6XR72 485 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 RNF207Q6ZRF8 634 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 MORC4Q8TE76 937 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 RNPC3Q96LT9 517 aaKnown RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 GUCD1Q96NT3 240 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
NEB-217ENST00000498015 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 CPVLQ9H3G5 476 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 CTNNA3Q9UI47 895 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 TBX21Q9UL17 535 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
NEB-217ENST00000498015 NT5C2P49902 561 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 RPS6P62753 249 aaKnown RBP8.5□□□□□ -1.05
NEB-217ENST00000498015 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
NEB-217ENST00000498015 PDE4DQ08499 809 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 KRT32Q14532 448 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 NFKBIBQ15653 356 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 USH1GQ495M9 461 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 MFSD5Q6N075 450 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 FAM126BQ8IXS8 530 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 ZSCAN31Q96LW9 406 aaPredicted RBP8.5□□□□□ -1.05
NEB-217ENST00000498015 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 WDR11Q9BZH6 1224 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 KRT23Q9C075 422 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 SEMA6BQ9H3T3 888 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 ZSWIM5Q9P217 1185 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 Q9Y3F1 56 aa8.5□□□□□ -1.05
NEB-217ENST00000498015 LCTP09848 1927 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms