RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PHF24Q9UPV7 400 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ARHGEF10O15013 1369 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 METP08581 1390 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CEP152O94986 1710 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF644Q9H582 1327 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 KIAA0100Q14667 2235 aaKnown RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SPATA31E1Q6ZUB1 1445 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 THSD7BQ9C0I4 1608 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 PKD1L3Q7Z443 1732 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SOBPA7XYQ1 873 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 J3QW42 95 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FZD9O00144 591 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 GABRDO14764 452 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FANCGO15287 622 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 PLIN1O60240 522 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FGAP02671 866 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 PABPC1P11940 636 aaKnown RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRIM27P14373 513 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 EPHA1P21709 976 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FGFR3P22607 806 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAP2K2P36507 400 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAP4K2Q12851 820 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FAPQ12884 760 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 IKBKEQ14164 716 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 KCTD2Q14681 263 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 STAT4Q14765 748 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 KRT72Q14CN4 511 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 FAM209AQ5JX71 171 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 HP1BP3Q5SSJ5 553 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CEP135Q66GS9 1140 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MSL1Q68DK7 614 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC6A19Q695T7 634 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAMDC2Q7Z304 686 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 PPFIBP1Q86W92 1011 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF227Q86WZ6 799 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 DGKHQ86XP1 1220 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 TICAM2Q86XR7 235 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 COL23A1Q86Y22 540 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MYO1HQ8N1T3 1032 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 MARCH10Q8NA82 808 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 NANOS1Q8WY41 292 aaKnown RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 EVI5LQ96CN4 794 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 C1orf159Q96HA4 380 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CAPNS2Q96L46 248 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CCDC140Q96MF4 163 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 RHOBTB2Q9BYZ6 727 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 GSX1Q9H4S2 264 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CCDC86Q9H6F5 360 aaKnown RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC5A4Q9NY91 659 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 NAGPAQ9UK23 515 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC6A14Q9UN76 642 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 APOBEC2Q9Y235 224 aaKnown RBP3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CORINQ9Y5Q5 1042 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 SBNO1A3KN83 1393 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CFAP47Q6ZTR5 3102 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 NRXN1Q9ULB1 1477 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 CFAP54Q96N23 3096 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 LAMB4A4D0S4 1761 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF292O60281 2723 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZFHX4Q86UP3 3567 aa3.2□□□□□ -1.9
CKS1BP2-201ENST00000497342 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 B4E1Z4 1266 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 H0YGN5 161 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 WNT9AO14904 365 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 UBOX5O94941 541 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 FBXO21O94952 628 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 KRT18P05783 430 aaKnown RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PHKG2P15735 406 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PLCG1P19174 1290 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CD33P20138 364 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CDC27P30260 824 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 L1CAMP32004 1257 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ECE1P42892 770 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PTSQ03393 145 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 C19orf57Q0VDD7 668 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 GBX1Q14549 363 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SEPT7Q16181 437 aaKnown RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMEM95Q3KNT9 176 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 C6orf118Q5T5N4 469 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SYDE2Q5VT97 1194 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAP1SQ66K74 1059 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PKN3Q6P5Z2 889 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 C20orf204Q6ZNR8 217 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PASD1Q8IV76 773 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRIM59Q8IWR1 403 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMEM192Q8IY95 271 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CHPFQ8IZ52 775 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 FAM43AQ8N2R8 423 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CBARPQ8N350 705 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ARHGEF39Q8N4T4 335 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC7A14Q8TBB6 771 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 WDR66Q8TBY9 1149 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PTPRN2Q92932 1015 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ABHD17AQ96GS6 310 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SCLYQ96I15 445 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SCYL1Q96KG9 808 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZFP42Q96MM3 310 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 GAS2L1Q99501 681 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 NUP88Q99567 741 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms