RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	ANAPC4	Q9UJX5	808 aa		12.03	□□□□□ -0.48
PSMD2-220	ENST00000496925	SALL3	Q9BXA9	1300 aa		12.03	□□□□□ -0.48
PSMD2-220	ENST00000496925	PLIN4	Q96Q06	1357 aa		12.03	□□□□□ -0.48
PSMD2-220	ENST00000496925	PLA2G6	O60733	806 aa		12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	ALDH5A1	P51649	535 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	PDE4D	Q08499	809 aa		12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	RNF207	Q6ZRF8	634 aa		12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	TBC1D10C	Q8IV04	446 aa		12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	TBC1D5	Q92609	795 aa		12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	RANBP17	Q9H2T7	1088 aa	Known RBP	12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	GPHN	Q9NQX3	736 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD2-220	ENST00000496925	CABYR	O75952	493 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	AKNAD1	Q5T1N1	836 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	CHST3	Q7LGC8	479 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	SLC43A3	Q8NBI5	491 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	CLEC4D	Q8WXI8	215 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	GAS2L1	Q99501	681 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	NOC4L	Q9BVI4	516 aa	Known RBP	12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	CERS4	Q9HA82	394 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	VTA1	Q9NP79	307 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	ADD3	Q9UEY8	706 aa	Known RBP	12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	YBX2	Q9Y2T7	364 aa	Known RBP	12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	LTBP2	Q14767	1821 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	COL6A3	P12111	3177 aa		12.01	□□□□□ -0.49
PSMD2-220	ENST00000496925	DNAH12	Q6ZR08	3092 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	PARP14	Q460N5	1801 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	RFXAP	O00287	272 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	DHX16	O60231	1041 aa	Known RBP	12	□□□□□ -0.49
PSMD2-220	ENST00000496925	SORBS3	O60504	671 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	IGHD	P01880	384 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	PDHB	P11177	359 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	SDS	P20132	328 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	RPS6	P62753	249 aa	Known RBP	12	□□□□□ -0.49
PSMD2-220	ENST00000496925	ZNF543	Q08ER8	600 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	ADGRE1	Q14246	886 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	NBPF20	Q3BBV1	942 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	DUSP28	Q4G0W2	176 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	CWC27	Q6UX04	472 aa	Known RBP	12	□□□□□ -0.49
PSMD2-220	ENST00000496925	BTNL9	Q6UXG8	535 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	SEPT14	Q6ZU15	432 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	HERVK_113	Q902F9	699 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	WNT8A	Q9H1J5	351 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12	□□□□□ -0.49
PSMD2-220	ENST00000496925	PLXNA1	Q9UIW2	1896 aa		12	□□□□□ -0.49
PSMD2-220	ENST00000496925	MYH7	P12883	1935 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	ZNF213	O14771	459 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	FGR	P09769	529 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	TXN	P10599	105 aa	Known RBP	11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	NOV	P48745	357 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	NKX3-2	P78367	333 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	TTLL4	Q14679	1199 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	RASIP1	Q5U651	963 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	SLC28A3	Q9HAS3	691 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	TCP11L1	Q9NUJ3	509 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	POLR3E	Q9NVU0	708 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	SLC4A7	Q9Y6M7	1214 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	NEDD4	P46934	1319 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	CCDC171	Q6TFL3	1326 aa		11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	GREB1L	Q9C091	1923 aa	Predicted RBP	11.99	□□□□□ -0.49
PSMD2-220	ENST00000496925	TNKS	O95271	1327 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	TMEM265	A0A087WTH1	108 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925		B4E1Z4	1266 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	KDM4A	O75164	1064 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	PURA	Q00577	322 aa	Known RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	HDAC1	Q13547	482 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	RAB30	Q15771	203 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	LY6K	Q17RY6	165 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	RPUSD2	Q8IZ73	545 aa	Known RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	EXOC6	Q8TAG9	804 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	MORC4	Q8TE76	937 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	ESR2	Q92731	530 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	TAAR1	Q96RJ0	339 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	MTG1	Q9BT17	334 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	MTIF3	Q9H2K0	278 aa	Known RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	RWDD1	Q9H446	243 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925		Q9Y3F1	56 aa		11.98	□□□□□ -0.49
PSMD2-220	ENST00000496925	ARIH2	O95376	493 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	CPT1A	P50416	773 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	PPP2R5B	Q15173	497 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	CHD1L	Q86WJ1	897 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	PLEKHM2	Q8IWE5	1019 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	ADGRF4	Q8IZF3	695 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	RETREG2	Q8NC44	543 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	ZFP91	Q96JP5	570 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	TTC14	Q96N46	770 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	RNF41	Q9H4P4	317 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	KAT14	Q9H8E8	782 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	DIAPH3	Q9NSV4	1193 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	NOD1	Q9Y239	953 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	MYH4	Q9Y623	1939 aa		11.97	□□□□□ -0.49
PSMD2-220	ENST00000496925	RBM47	A0AV96	593 aa	Known RBP	11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	ATP2A2	P16615	1042 aa	Known RBP	11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	SKIV2L	Q15477	1246 aa	Known RBP	11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	CDC37	Q16543	378 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	BRDT	Q58F21	947 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	PPP2R2D	Q66LE6	453 aa		11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	PNMA1	Q8ND90	353 aa		11.96	□□□□□ -0.49
PSMD2-220	ENST00000496925	AFG1L	Q8WV93	481 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms