RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 ADD3Q9UEY8 706 aaKnown RBP11.53□□□□□ -0.56
SH3D21-204ENST00000496636 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 FAM50BQ9Y247 325 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
SH3D21-204ENST00000496636 BAZ2AQ9UIF9 1905 aaKnown RBP11.52□□□□□ -0.56
SH3D21-204ENST00000496636 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.56
SH3D21-204ENST00000496636 WDFY4Q6ZS81 3184 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 KPNA6O60684 536 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 EFCAB14O75071 495 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
SH3D21-204ENST00000496636 KCNA5P22460 613 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
SH3D21-204ENST00000496636 CAGE1Q8TC20 777 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 AFAP1L1Q8TED9 768 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 CEP95Q96GE4 821 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 TRERF1Q96PN7 1200 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
SH3D21-204ENST00000496636 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 MTMR4Q9NYA4 1195 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 ISY1Q9ULR0 285 aaKnown RBP11.52□□□□□ -0.57
SH3D21-204ENST00000496636 TANC1Q9C0D5 1861 aa11.52□□□□□ -0.57
SH3D21-204ENST00000496636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 PLA2G6O60733 806 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 MYL3P08590 195 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 ALAS1P13196 640 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 ATP5JP18859 108 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 WDR5P61964 334 aaKnown RBP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 IKQ13123 557 aaPredicted RBP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 EEPD1Q7L9B9 569 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
SH3D21-204ENST00000496636 HAUS7Q99871 368 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
SH3D21-204ENST00000496636 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 HMMRO75330 724 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 GJB5O95377 273 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 PTGS1P23219 599 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 SLC1A4P43007 532 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 ERVK-21P61565 698 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 PPP2R5BQ15173 497 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 STAG1Q8WVM7 1258 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 FBXL18Q96ME1 805 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 MPHOSPH6Q99547 160 aaKnown RBP11.5□□□□□ -0.57
SH3D21-204ENST00000496636 RAD9AQ99638 391 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 PRKAG3Q9UGI9 489 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 CTNNA3Q9UI47 895 aa11.5□□□□□ -0.57
SH3D21-204ENST00000496636 ZDBF2Q9HCK1 2354 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 SCN10AQ9Y5Y9 1956 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 ABHD14A-ACY1A0A1B0GW23 586 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
SH3D21-204ENST00000496636 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 MINDY4BA8MYZ0 360 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 IL9P15248 144 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 SLFNL1Q499Z3 407 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 NSMFQ6X4W1 530 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
SH3D21-204ENST00000496636 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
SH3D21-204ENST00000496636 CRBNQ96SW2 442 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 PUS7LQ9H0K6 701 aaKnown RBP11.49□□□□□ -0.57
SH3D21-204ENST00000496636 BOLA2Q9H3K6 86 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 SUGCTQ9HAC7 445 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 CCPG1Q9ULG6 757 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 ZNF318Q5VUA4 2279 aa11.49□□□□□ -0.57
SH3D21-204ENST00000496636 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 LINC01553A4QN01 128 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 A6NJR5 290 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 SELPP16109 830 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 GNAT2P19087 354 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 TDO2P48775 406 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 ALDH5A1P51649 535 aaPredicted RBP11.48□□□□□ -0.57
SH3D21-204ENST00000496636 RBL2Q08999 1139 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 PTPROQ16827 1216 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 LRRC8DQ7L1W4 858 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 SPRED2Q7Z698 418 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 NEDD1Q8NHV4 660 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 NEK9Q8TD19 979 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 MFSD14AQ96MC6 490 aa11.48□□□□□ -0.57
SH3D21-204ENST00000496636 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms