RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 HSPA8P11142 646 aaKnown RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 SMPD1P17405 629 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 ALDH1B1P30837 517 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 LBX1P52954 281 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 SART3Q15020 963 aaKnown RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 RTN1Q16799 776 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 TMEM259Q4ZIN3 620 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 C12orf60Q5U649 245 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 KRT40Q6A162 431 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 BICD2Q8TD16 824 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 MKNK2Q9HBH9 465 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 DAGLAQ9Y4D2 1042 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 MROH7-TTC4A0A0A0MT08 1334 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 TROAPQ12815 778 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 MAP9Q49MG5 647 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 SPECC1Q5M775 1068 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 RCSD1Q6JBY9 416 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 SYNE3Q6ZMZ3 975 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 SH3BP5LQ7L8J4 393 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 IQCA1Q86XH1 822 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRPF38AQ8NAV1 312 aaKnown RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 KLHL23Q8NBE8 558 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 RNF41Q9H4P4 317 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 ARHGEF10LQ9HCE6 1279 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 ATP8A2Q9NTI2 1148 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 VPS54Q9P1Q0 977 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PAXBP1Q9Y5B6 917 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 FLT1P17948 1338 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 LAMA4Q16363 1823 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 BAG3O95817 575 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 MBD3O95983 291 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 FBXO45P0C2W1 286 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 ME1P48163 572 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRR20EP86478 221 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRR20CP86479 221 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRR20DP86480 221 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRR20BP86481 221 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PRR20AP86496 221 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 EARS2Q5JPH6 523 aaKnown RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 TMEM87AQ8NBN3 555 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 ZNF396Q96N95 335 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 GOLPH3LQ9H4A5 285 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 ZNF277Q9NRM2 450 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 PUF60Q9UHX1 559 aaKnown RBP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.01□□□□□ -1.29
SSBP1-213ENST00000496622 MYH13Q9UKX3 1938 aa7.01□□□□□ -1.29
SSBP1-213ENST00000496622 GPR75-ASB3A0A0A6YYF3 556 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 A0A1B0GVL5 298 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 RAD17O75943 681 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 NAT2P11245 290 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 MRE11P49959 708 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 RAB15P59190 212 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 ZNF445P59923 1031 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 KIF23Q02241 960 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 CRACR2BQ8N4Y2 399 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 ECE2O60344 883 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 WDHD1O75717 1129 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 NR3C2P08235 984 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 TSPY3P0CV98 308 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 TSPY8P0CW00 308 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 DPEP1P16444 411 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 SSRP1Q08945 709 aaKnown RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 PKDCCQ504Y2 493 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 APOBEC3HQ6NTF7 200 aaKnown RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 LRSAM1Q6UWE0 723 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 TTC30BQ8N4P2 665 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 CLIC6Q96NY7 704 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 SCAND2PQ9GZW5 306 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 COA1Q9GZY4 146 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 USP40Q9NVE5 1235 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 ARPP21Q9UBL0 812 aaPredicted RBP7□□□□□ -1.29
SSBP1-213ENST00000496622 PCDHA7Q9UN72 937 aa7□□□□□ -1.29
SSBP1-213ENST00000496622 YDJCA8MPS7 323 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 POTECB2RU33 542 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 YBX3P16989 372 aaKnown RBP eCLIP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 IFNAR1P17181 557 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 GRIN1Q05586 938 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 PDE4BQ07343 736 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 PKN1Q16512 942 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 ZSCAN26Q16670 478 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 C15orf52Q6ZUT6 534 aaKnown RBP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 TTC30AQ86WT1 665 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 DIS3L2Q8IYB7 885 aaKnown RBP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 C7orf43Q8WVR3 580 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 GPKOWQ92917 476 aaPredicted RBP eCLIP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 ZSCAN16Q9H4T2 348 aaPredicted RBP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 MYH7P12883 1935 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 WDR19Q8NEZ3 1342 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
SSBP1-213ENST00000496622 FGRP09769 529 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 RASA1P20936 1047 aa6.99□□□□□ -1.29
SSBP1-213ENST00000496622 KCNA3P22001 575 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms