RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 HOMER1Q86YM7 354 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 CMTR1Q8N1G2 835 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 SYTL5Q8TDW5 730 aaPredicted RBP18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 JAKMIP1Q96N16 626 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 HTATIP2Q9BUP3 242 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 XPNPEP3Q9NQH7 507 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 SLC12A7Q9Y666 1083 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 SYNRGQ9UMZ2 1314 aa18.73■□□□□ 0.59
DNMT3A-215ENST00000496570 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 PGK1P00558 417 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 PTGS1P23219 599 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 KIF5BP33176 963 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 HSD17B4P51659 736 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 TMEM63BQ5T3F8 832 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 FANCBQ8NB91 859 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 DNERQ8NFT8 737 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
DNMT3A-215ENST00000496570 MYADML2A6NDP7 307 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 CTAGE5O15320 804 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 DUSP11O75319 330 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 CALM1P0DP23 149 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 CALM2P0DP24 149 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 CALM3P0DP25 149 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 LRRC26Q2I0M4 334 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 CCSAPQ6IQ19 270 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 FBXO16Q8IX29 292 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 ARRDC4Q8NCT1 418 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 DPF3Q92784 378 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 TAAR1Q96RJ0 339 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 AGXT2Q9BYV1 514 aa18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 UPF3AQ9H1J1 476 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 FAM217BQ9NTX9 383 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 ADD3Q9UEY8 706 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-215ENST00000496570 H0YGN5 161 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 CEP290O15078 2479 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 ADCYAP1R1P41586 468 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 FUT2Q10981 343 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 EEPD1Q7L9B9 569 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 MCF2L2Q86YR7 1114 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 FBXL16Q8N461 479 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 KLHDC9Q8NEP7 349 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 SENP6Q9GZR1 1112 aaPredicted RBP18.7■□□□□ 0.58
DNMT3A-215ENST00000496570 RBM47A0AV96 593 aaKnown RBP18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 SMPD1P17405 629 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 GNAQP50148 359 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 NKX3-2P78367 333 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 Q6ZUG5 572 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 PHF24Q9UPV7 400 aa18.69■□□□□ 0.58
DNMT3A-215ENST00000496570 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 CFBP00751 764 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 CST5P28325 142 aaPredicted RBP18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 GJA9P57773 515 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 TNFAIP2Q03169 654 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 CNTNAP5Q8WYK1 1306 aa18.68■□□□□ 0.58
DNMT3A-215ENST00000496570 hCG_1642624A0A1W2PR95 340 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 ZBTB43O43298 467 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 EVI5O60447 810 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 CDC27P30260 824 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 RCAN1P53805 252 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 BRF1Q92994 677 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 NID2Q14112 1375 aa18.67■□□□□ 0.58
DNMT3A-215ENST00000496570 SEC24BO95487 1268 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 PSMA5P28066 241 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 ATN1P54259 1190 aaPredicted RBP18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 SNX17Q15036 470 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 IQSEC1Q6DN90 963 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 RNF180Q86T96 592 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 FERMT2Q96AC1 680 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 RMDN3Q96TC7 470 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 TSEN34Q9BSV6 310 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 PXMP2Q9NR77 195 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 MAP3K20Q9NYL2 800 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 PCDH10Q9P2E7 1040 aa18.66■□□□□ 0.58
DNMT3A-215ENST00000496570 A0A1W2PQ45 241 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms